If the exact rename matrix for a particular ObjectId isn't square we
crashed with an ArrayIndexOutOfBoundsException because the matrix
entries were encoded backwards. The encode function accepts the
source (aka deleted) index first, not second. Add a unit test to
cover this non-square case to ensure we don't have this regression
in the future.
Change-Id: I5b005e5093e1f00de2e3ec104e27ab6820203566
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
It is useful to be able to replace an existing Change-Id
in the message, for example if the user decides not to
amend the previous commit.
Bug: 321188
Change-Id: I594e7f9efd0c57d794d2bd26d55ec45f4e6a47fd
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
Signed-off-by: Chris Aniszczyk <caniszczyk@gmail.com>
TreeWalk calls this value "path", while "name" is the stuff after the
last slash. FileHeader should do the same thing to be consistent.
Rename getOldName to getOldPath and getNewName to getNewPath.
Bug: 318526
Change-Id: Ib2e372ad4426402d37939b48d8f233154cc637da
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
A bug in rename detection would cause file scores to be wrong. The
bug was due to the way rename detection would judge the similarity
between files. If file A has three lines containing 'foo', and file
B has 5 lines containing 'foo', the rename detection phase should
record that A and B have three lines in common (the minimum of the
number of times that line appears in both files). Instead, it would
choose the the number of times the line appeared in the destination
file, in this case file B. I fixed the bug by having the
SimilarityIndex instead choose the minimum number, as it should. I
also added a test case to verify that the bug had been fixed.
Change-Id: Ic75272a2d6e512a361f88eec91e1b8a7c2298d6b
IndexDiff was re-implemented and now uses TreeWalk instead
of GitIndex. Additionally, gitignore support and retrieval of
untracked files was added.
Change-Id: Ie6a8e04833c61d44c668c906b161202b200bb509
Signed-off-by: Jens Baumgart <jens.baumgart@sap.com>
Signed-off-by: Chris Aniszczyk <caniszczyk@gmail.com>
When the add parameter is set all modified and deleted files
are staged prior to commit.
Change-Id: Id23bc25730fcdd151386cd495a7cdc0935cbc00b
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
This change is mainly done for a subsequent commit
which will introduce the "all" parameter to the Commit
command.
Bug: 318439
Change-Id: I85a8a76097d0197ef689a289288ba82addb92fc9
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
The CommitCommand should not use java.io to delete MERGE_HEAD and MERGE_MSG
files since Repository already has utility methods for that.
Change-Id: If66a419349b95510e5b5c2237a91f06c1d5ba0d4
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
For daemons we might want to disable delta compression entirely, or
in some strange case an administrator might need to turn of delta
reuse. Expose these normally internal pack settings through the pack
configuration section.
Change-Id: I39bfefee8384c864cc04ffac724f197240c8a11a
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
When we are creating a pack the higher level application should be able
to override the PackConfig used, allowing it to control the number of
threads used or how much memory is allocated per writer.
Change-Id: I47795987bb0d161d3642082acc2f617d7cb28d8c
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
We only use these variables once, so just put them at the proper
use site and avoid assigning the local variable. The code is a
bit shorter and the intent is a little bit more clear.
Change-Id: I70d120fb149b612ac93055ea39bc053b8d90a5db
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This refactoring permits applications to configure global per-process
settings for all packing and easily pass it through to per-request
PackWriters, ensuring that the process configuration overrides the
repository specific settings.
For example this might help in a daemon environment where the server
wants to cap the resources used to serve a dynamic upload pack
request, even though the repository's own pack.* settings might be
configured to be more aggressive. This allows fast but less bandwidth
efficient serving of clients, while still retaining good compression
through a cron managed `git gc`.
Change-Id: I58cc5e01b48924b1a99f79aa96c8150cdfc50846
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
Currently, a NullPointerException occurs in this case. We should
instead throw a more meaningful Exception with a proper message.
This is a very "stupid" implementation which simply checks for
the existence of a ".gitmodules" file.
Bug: 300731
Bug: 306765
Bug: 308452
Bug: 314853
Change-Id: I155aa340a85cbc5d7d60da31dba199fc30689b67
Signed-off-by: Mathias Kinzler <mathias.kinzler@sap.com>
the following tests fail under windows because certain inputstreams
are not closed and files cannot be deleted because of that. The
main problem I found is UnpackedObject.InflaterInputStream.close().
This method may throw exceptions found by checkValidEndOfStream()
but doesn't call super.close() before leaving. It is not clear to me
which resources a close() method should release before it throws an
exception. But those reseources which are not published to the
outside and which therefore cannot be closed by other means have to
be closed in all cases.
I changed the close() method to call super.close() under all
circumstances.
failing tests:
testStandardFormat_LargeObject_TruncatedZLibStream(org.eclipse.jgit.storage.file.UnpackedObjectTest)
testStandardFormat_LargeObject_TrailingGarbage(org.eclipse.jgit.storage.file.UnpackedObjectTest)
testPackFormat_SmallObject(org.eclipse.jgit.storage.file.UnpackedObjectTest)
Change-Id: Id2e609a29e725aad953ff9bd88af6381df38399d
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
By deferring tag sorting until the commit is produced by the walker
we can avoid an infinite loop that was triggered by trying to sort
tags while allocating a commit. This also avoids needing to look
at commits which aren't going to be produced in the result.
Bug: 321103
Change-Id: I25acc739db2ec0221a50b72c2d2aa618a9a75f37
Reviewed-by: Mathias Kinzler <mathias.kinzler@sap.com>
Reviewed-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
These need to be dynamic based on the current thread's environment
at time of execution in order to be properly localized for the end
user that will be seeing these messages.
Change-Id: I4976f462cfe606edd2761c0e36b2f6b20f63d53c
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
By permitting the caller of PackWriter to select the Executor it
uses for task execution, we give the caller the ability to manage
the lifecycle of the thread pool, including reusing it across
concurrent pack generators.
This is the first step to supporting application thread pools
within Daemon or another managed service like Gerrit Code Review.
Change-Id: I96bee7b9c30ff9885f2bd261d0b6daaac713b5a4
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
Add a method isDirectoryFileConflict() to NameConflictTreeWalk which
tells whether the current path is part of a directory/file conflict.
Change-Id: Iffcc7090aaec743dd6f3fd1a333cac96c587ae5d
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This is caused by a recursion in PlotWalk.getTags().
As a hotfix, the sort was simply removed. The sort
must be re-implemented so that parseAny() is not called
again (currently, this happens in the PlotRefComparator).
Change-Id: I060d26fda8a75ac803acaf89cfb7d3b4317328f3
Signed-off-by: Mathias Kinzler <mathias.kinzler@sap.com>
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
File pairs that are very dissimilar during a diff were not being
broken apart into their constituent ADD/DELETE pairs. The leads to
sub-optimal rename detection. Take, for example, this situation:
A file exists at src/a.txt containing "foo". A user renames src/a.txt
to src/b.txt, then adds a new src/a.txt containing "bar".
Even though the old a.txt and the new b.txt are identical, the
rename detection algorithm would not detect it as a rename since
it was already paired in a MODIFY. I added code to split all
MODIFYs below a certain score into their constituent ADD/DELETE
pairs. This allows situations like the one I described above to be
more correctly handled.
Change-Id: I22c04b70581f206bbc68c4cd1ee87a1f663b418e
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
Add methods to the Repository class which write into MERGE_HEAD
and MERGE_MSG files. Since we have the read methods in the same
class this seems to be the right place.
Change-Id: I5dd65306ceb06e008fcc71b37ca3a649632ba462
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
LockFile.commit fails if another thread concurrently reads
the base file. The problem is fixed by retrying the rename
operation if it fails.
Change-Id: I6bb76ea7f2e6e90e3ddc45f9dd4d69bd1b6fa1eb
Bug: 308506
Signed-off-by: Jens Baumgart <jens.baumgart@sap.com>
There were some broken links, incorrect uses of @value, an invalid
tag and an outdated comment.
Change-Id: I22886bcc869a4b62bd606ebed40669f7b4723664
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This simplifies the logic for those who already have an ObjectReader
on hand want to reuse it to lookup a single path.
Change-Id: Ief17d6b2a0674ddb34bbc9f43121b756eae960fb
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This exposes a load and save method, allowing a Repository to denote
that it has a persistent configuration of some kind which can be
accessed by the application, without needing to know exact details
of how its stored .
Change-Id: I7c414bc0f975b80f083084ea875eca25c75a07b2
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
This is e.g. useful when a client of the AddCommand has
additional rules to ignore files. In Eclipse a resource can
be set to derived or be excluded by preferences.
Change-Id: I6c47e54a1ce26315faf5ed0723298ad2c2db197c
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
The working tree iterator has perfect knowledge of the path structure
as well as immediate information about whether or not an ignore file
even exists at this level. We can exploit that to simplify the
logic and running time for testing ignored file status by pushing
all of the checks down into the iterator itself.
Change-Id: I22ff534853e8c5672cc5c2d9444aeb14e294070e
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
CC: Charley Wang <chwang@redhat.com>
CC: Chris Aniszczyk <caniszczyk@gmail.com>
CC: Stefan Lay <stefan.lay@sap.com>
CC: Matthias Sohn <matthias.sohn@sap.com>
GitIndex.write fails if another thread concurrently reads
the index file. The problem is fixed by retrying the rename
operation if it fails.
Bug: 311051
Change-Id: Ib243d2a90adae312712d02521de4834d06804944
Signed-off-by: Jens Baumgart <jens.baumgart@sap.com>
The WorkingTreeIterator has a method to check whether
the current file differs from the corresponding index
entry. This commit improves this check to also handle
racy git situations.
See http://git.kernel.org/?p=git/git.git;a=blob;f=Documentation/technical/racy-git.txt;hb=HEAD
Change-Id: I3ad0897211dcbb2eac9eebcb19d095a5052fb06b
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
To mark an entry racily clean we set its length to 0 (like native git
does). Entries which are not racily clean and have zero length can be
distinguished from racily clean entries by checking P_OBJECTID
against the SHA1 of empty content. When length is 0 and P_OBJECTID is
different from SHA1 of empty content we know the entry is marked
racily clean.
See http://dev.eclipse.org/mhonarc/lists/jgit-dev/msg00488.html
Change-Id: I689552931441ab51964b430b303160c9126b66af
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
We have a constant for .gitignore, so use it. While we are in
the same method, correct the reference of ".git" to be the actual
GIT_DIR given. This might not be within the work tree if the
GIT_DIR and GIT_WORK_TREE environment variables were used.
Change-Id: I38e1cec13405109b9c347858b38dd9fb2f1f2560
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
CC: Charley Wang <chwang@redhat.com>
CC: Chris Aniszczyk <caniszczyk@gmail.com>
CC: Stefan Lay <stefan.lay@sap.com>
CC: Matthias Sohn <matthias.sohn@sap.com>
This never should have been exposed on the top of the
AbstractTreeIterator type hierarchy. There is no concept of a
timestamp in a canonical tree read from the object database, and
the time in the DirCache isn't what we want here either.
Actually all that we need is to find the files whose names are
".gitignore" and are below the root directory. We can accomplish
that with a suffix filter, and process them immediately.
Change-Id: Ib09cbf81a9e038452ce491385c65498312e2916b
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
CC: Charley Wang <chwang@redhat.com>
CC: Chris Aniszczyk <caniszczyk@gmail.com>
CC: Stefan Lay <stefan.lay@sap.com>
CC: Matthias Sohn <matthias.sohn@sap.com>
If we have two adds of the same object but no deletes the detector
threw an NPE because the entry that came back from the deleted map
was null (no matching objects). In this case we need to put the
adds all back onto the list of left over additions since they did
not match a delete.
Change-Id: Ie68fbe7426b4dc0cb571a08911c7adbffff755d5
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
CC: Jeffrey Schumacher" <jeffschu@google.com>
We didn't correctly handle the zlib trailer for an object. If the
trailer bytes were outside of the current buffer window but we had
fully inflated the object itself, we broke out of the loop (as we had
our target size) but inflate wasn't finished (as it did not yet get
the trailer) so we failed the test and threw a corruption exception.
Use an infinite loop and only break out when the inflater is done.
Change-Id: I7c9bbbeb577a990d9bc56a50ebd485935460f6c8
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
The DeltaCache will most likely need to copy the compressed delta
into a new buffer in order to compact away the wasted space at the
end caused by over allocation. Since we don't need the uncompressed
format anymore, null out our only reference to it so the GC can
reclaim this memory if it needs to perform a collection in order
to satisfy the cache's allocation attempt.
Change-Id: I50403cfd2e3001b093f93a503cccf7adab43cc9d
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
A programming error using the Inflater API led to an infinite
loop within IndexPack, caused by the Inflater returning 0 from
the inflate() method, but it didn't want more input. This happens
when it has reached the end of the stream, or has reached a spot
asking for an external dictionary. Such a case is a failure for us,
and we should abort out.
Thanks to Alex for pointing out that we had 3 implementations of
the inflate rountine, which should be consolidated into one and
use a switch to determine where to load data from.
Bug: 317416
Change-Id: I34120482375b687ea36ed9154002d77047e94b1f
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
During the exact rename detection phase in RenameDetector, ties were
resolved on a first-found basis. I added support for file path based
tie breaking during that phase. Basically, there are four situations
that have to be handled:
One add matching one delete:
In this simple case, we pair them as a rename.
One add matching many deletes:
Find the delete whos path matches the add the closest, and
pair them as a rename.
Many adds matching one delete:
Similar to the above case, we find the add that matches the
delete the closest, and pair them as a rename. The other adds
are marked as copies of the delete.
Many adds matching many deletes:
Build a scoring matrix similar to the one used for content-
based matching, scoring instead by file path. Some of the
utility functions in SimilarityRenameDetector are used in
this case, as we use the same encoding scheme. Once the
matrix is built, scan it for the best matches, marking them
as renames. The rest are marked as copies.
I don't particularly like the idea of using utility functions right
out of SimilarityRenameDetector, but it works for the moment. A later
commit will likely refactor this into a common utility class, as well
as bringing exact rename detection out of RenameDetector and into a
separate class, much like SimilarityRenameDetector.
Change-Id: I1fb08390aebdcbf20d049aecf402a36506e55611
Added possibility to compare the current entry of a WorkingTreeIterator
to a given DirCacheEntry. This is done to detect whether an entry
in the index is dirty or not. 'Dirty' means that the file in the working tree
is different from what's in the index. Merge algorithms will make use of
this to detect conflicts.
Change-Id: I3ff847f4bf392553dcbd6ee236c6ca32a13eedeb
Signed-off-by: Christian Halstrick <christian.halstrick@sap.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
When the path is prefixed with ~ the URI parser thought about this
as /~. Strip the / if the next character is the tilde.
Bug: 307017
Change-Id: I58203e5617956b46d83e8987d1f8042beddffac3
Signed-off-by: Robin Rosenberg <robin.rosenberg@dewire.com>
The new Add command adds files to the Git Index.
It uses the DirCache to access the git index. It
works also in case of an existing conflict.
Fileglobs (e.g. *.c) are not yet supported.
The new Add command does add ignored files because
there is no gitignore support in jgit yet.
Bug: 318440
Change-Id: If16fdd4443e46b27361c2a18ed8f51668af5d9ff
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
This patch adds ignore compatibility to jgit. It encompasses
exclude files as well as .gitignore. Uses TreeWalk and
FileTreeIterator to find nodes and parses .gitignore
files when required. The patch includes a simple cache that
can be used to save results and avoid excessive gitignore
parsing.
CQ: 4302
Bug: 303925
Change-Id: Iebd7e5bb534accca4bf00d25bbc1f561d7cad11b
Signed-off-by: Chris Aniszczyk <caniszczyk@gmail.com>
Signed-off-by: Stefan Lay <stefan.lay@sap.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Optimized a small loop in findExactRenames. The loop would go through
all the items in a list of DiffEntries even after it already found
what it was looking for. I made it break out of the loop as soon as
a good match was found.
Change-Id: I28741e0c49ce52d8008930a87cd1db7037700a61
The javadoc for the setRenameLimit method in RenameDetector said
that you could only have limits in the range (0,100), implying
that 0 and 100 were illegal inputs. The code, however, allowed 0 and
100. I changed the javadoc to say that the range [0,100] was legal.
I also documented the IllegalArgumentException that is thrown if the
limit is outside that range.
Change-Id: I916838f254859f6f0e1516bb55b8e7dc87e57dc2
The scoring method was not taking into account the similarity of
the file paths and file names. I changed the metric so that it is 99%
based on content (which used to be 100% of the old metric), and 1%
based on path similarity. Of that 1%, half (.5% of the total final
score) is based on the actual file names (e.g. "foo.java"), and half
on the directory (e.g. "src/com/foo/bar/").
Change-Id: I94f0c23bf6413c491b10d5625f6ad7d2ecfb4def
The scoring logic in SimilarityIndex was dividing by the max file
size. If both files are empty, this would cause a div by zero
error. This case cannot currently happen, since two empty files
would have the same SHA1, and would therefore be caught in the
earlier SHA1 based detection pass. Still, if this logic eventually
gets separated from that pass, a div by zero error would occur.
I changed the logic to instead consider two empty files to have a
similarity score of 100.
Change-Id: Ic08e18a066b8fef25bb5e7c62418106a8cee762a
Prior to this change, files that were very different in size (enough
so that they could not have enough in common to be detected as
renames) were still having their scores calculated. I added an
optimization to skip such files. For example, if the rename detection
threshold is 60%, the larger file is 200kb, and the smaller file is
50kb, the pair cannot be counted as a rename since they cannot
possibly share 60% of their content in common. (200*.6=120, 120>50)
Change-Id: Icd8315412d5de6292839778e7cea7fe6f061b0fc
Jens Baumgart
Robin Rosenberg
Shawn O. Pearce
Stefan Lay
Jeff Schumacher
Christian Halstrick
Mathias Kinzler
Robin Stocker
Charley Wang