The previous algorithm selected commits by creating bitmaps at
each branch tip, doing a revwalk to populate each bitmap, and
looping in this way:
1) Select the remaining branch with the most commits (the branch
whose bitmap has the highest cardinality)
2) Select well-spaced bitmaps in that branch
3) Remove commits in the selected branch from the remaining
branch-tip bitmaps
4) Repeat at #1
This algorithm gave good commit selection on all branches but
a more uniform selection on "important" branches, where branch
length is the proxy for "important". However the algorithm
required N bitmaps of size M solely for the purpose of commit
selection, where N is the number of branch tips in the primary
GC pack, and M is the number of objects in the pack.
This new algorithm uses branch modification date as the proxy for
"important" branches, replacing the N*M memory allocation with a
single M-sized bitmap and N revwalks from new branch tips to
shared history (which will be short when there is a lot of shared
history).
GcCommitSelectionTest.testDistributionOnMultipleBranches verifies
that this algorithm still yields good coverage on all branches.
Change-Id: Ib6019b102b67eabb379e6b85623e4b5549590e6e
Signed-off-by: Terry Parker <tparker@google.com>
Test that the commit selection algorithm provides appropriate
coverage across all branches.
Change-Id: I82c71b52068f01e8cef2398aecfec8e144d9a68b
Signed-off-by: Terry Parker <tparker@google.com>
If I run
git config --global protocol.version 2
mkdir repo
cd repo
git init --bare
git remote add origin https://go.googlesource.com/proposal
git fetch --depth=1
git fetch --unshallow
then I expect to have a full history, just as though I had fetched
without --depth in the first place. Instead, it reports success
but does not fetch enough objects:
$ git fsck
notice: HEAD points to an unborn branch (master)
Checking object directories: 100% (256/256), done.
Checking objects: 100% (468/468), done.
broken link from commit 2c6bc83f234085c8eadb7ea33405ce6223c44d1b
to commit 878975cf2b600675b4c905e5d9591bd24541ae9e
missing commit 878975cf2b600675b4c905e5d9591bd24541ae9e
dangling commit 314be00dae78dd526851f5635e6349014e2ad0c2
The false success indicates problems in the client and the server.
Git 2.18-rc2 (the client) ought to have been more defensive, noticing
the incomplete history. The greater error is in JGit (the server),
which neglects to send the objects requested.
When serving protocol v0 requests, JGit sends the correct objects by
taking unshallowCommits into account when generating the pack to send
to the client. Do the same in the protocol v2 code path. I forgot to
do this in v5.0.0.201806050710-rc3~6 (Teach UploadPack shallow fetch
in protocol v2, 2018-03-15).
Reported-by: Russ Cox <rsc@golang.org>
Change-Id: I282b45f47616a641b9e8d6210b4a070d3efdbb9b
Signed-off-by: Jonathan Nieder <jrn@google.com>
Instead, do it when we return the first PlotCommit from next().
On a repository with many refs, getAllRefsByPeeledObjectId() can
take a while. Doing a late initialization simplifies the handling
of a PlotWalk.
EGit, for instance, creates and configures an instance, and then
does the real walk in a background job. With late initialization,
the potentially expensive getAllRefsByPeeledObjectId() also occurs
in that background job.
Bug: 485743
Change-Id: I84c020cf8f7afda6f181778786612b8e6ddd7ed8
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Change-Id: I2f1c81839d2d78ddfd10b3992d1145546d10fa8c
Signed-off-by: Michael Keppler <Michael.Keppler@gmx.de>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.0:
Prepare 5.0.1-SNAPSHOT builds
JGit v5.0.0.201806131550-r
JGit v5.0.0.201806131210-r
Downgrade Apache httpclient to 4.5.2.v20170210-0925
RefUpdateTest: Refactor to not use deprecated Repository#getAllRefs
Propagate failure of ssh command to caller of SshSupport
Make JGit describe behaves same as c-git for lightweight tags
Fix issues with LFS on GitHub (SSH)
Change-Id: I0471440919adfdbfc72996711d9e0bbd1f3cf477
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Eclipse platform uses this version from the Oxygen Orbit release for
Photon. In order to avoid that we end up with two slightly different
versions in the same p2 repository of the simultaneous release we
downgrade temporarily from the version 4.5.2.v20180410-1551 in the
Photon Orbit release.
See
https://dev.eclipse.org/mhonarc/lists/cross-project-issues-dev/msg15659.html
Change-Id: Id46a840aa4b1010af7fe311498f17f1f2e5b81e0
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
When SshSupport.runSshCommand fails since the executed external ssh
command failed throw a CommandFailedException.
If discovery of LFS server fails due to failure of the
git-lfs-authenticate command chain the CommandFailureException to the
LfsConfigInvalidException in order to allow root cause analysis in the
application using that.
Change-Id: I2f9ea2be11274549f6d845937164c248b3d840b2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
JGit now considers lightweight tags only if the --tags option is set
i.e. `git.describe().setAllTags(true)` has to be set, else the default
is now as in c git:
Only annotated tags are evaluated unless you pass true
equivalent to --tags (or --all) by the option setAllTags.
Hint: This (still) doesn't address any difference between c-git
`--all` and `!--all --tags` behavior;
perhaps this might be a follow up request
Bug: 423206
Change-Id: I9a3699756df0b9c6a7c74a7e8887dea0df17c8e7
Signed-off-by: Marcel Trautwein <me+eclipse@childno.de>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* URIish seems to have a tiny feature (bug?). The path of the URI
starts with a '/' only if the URI has a port set (it seems).
* GitHub does not return SSH authorization on a single line as Gerrit
does - need to account for that.
* Increase the SSH git-lfs-authenticate timeout, as GitHub sometimes
responds slower than expected.
* Guard against NPE in case the download action does not contain any
additional headers.
Change-Id: Icd1ead3d015479fd4b8bbd42ed42129b0abfb95c
Signed-off-by: Markus Duft <markus.duft@ssi-schaefer.com>
Change-Id: Ib4ebc57236bdea663f27295764886413e2550580
Signed-off-by: Michael Keppler <Michael.Keppler@gmx.de>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Jsch checks only for the availability of the algorithms given by
Jsch-internal config keys "CheckCiphers", "CheckKexes", and
"CheckSignatures". If the ssh config defines any algorithms
unknown to Jsch not listed in those keys, it'll still propose them
during the negotiation phase, and run into an NPE later on if the
server happens to propose such an algorithm and it gets chosen.
Jsch reads those "CheckCiphers" and the other values from either a
session-local config, or the global static Jsch config. It bypasses
~/.ssh/config for these values.
Therefore, copy these values from the config as read from
~/.ssh/config into the session-specific config. That makes Jsch
check _all_ configured algorithms up front, discarding any for
which it has no implementation. Thus it proposes only algorithms
it actually can handle.
Bug: 535672
Change-Id: I6a68e54f4d9a3267e895c536bcf3c58099826ad5
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
* Larger eager timeout to compensate for high-latency lines
* Respect eager timeout in case the server uses "expiresIn"
Change-Id: Id87da1eea874e70b69eaccf35c84af4c3bb50770
Signed-off-by: Markus Duft <markus.duft@ssi-schaefer.com>
From the javadoc for Files.list:
"The returned stream encapsulates a DirectoryStream. If timely disposal
of file system resources is required, the try-with-resources construct
should be used to ensure that the stream's close method is invoked
after the stream operations are completed."
This is the only call to Files#newDirectoryStream that is not already in
a try-with-resources.
Change-Id: I91e6c56b5d74e8435457ad6ed9e6b4b24d2aa14e
(cherry picked from commit 1c16ea4601)
* stable-5.0:
Use constant for ".lock"
Simplify locking of FileRepository's index snapshot
Refactor FileRepository.detectIndexChange()
Change-Id: Ifd427711359bcf38b2c877b2143d45bff0c9895a
Signed-off-by: Jonathan Nieder <jrn@google.com>
synchronize on simple Object monitor instead of using ReentrantLock
Change-Id: I897020ab35786336b51b0fef76ea6071aff8aefa
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.0:
Update to latest Photon Orbit R20180606145124
Ensure index change event is fired when index snapshot changed
Change-Id: I8724fc92999d2bc0f8bde5e401156738dd9f1ee6
Signed-off-by: Jonathan Nieder <jrn@google.com>
Zip Slip [1] is an arbitrary file write generic vulnerability, that can
be achieved using a specially crafted zip (or bzip2, gzip, tar, xz, war)
archive, that holds path traversal filenames.
According to Maven's announcement [2] several plugins use plexus-archiver to
unpack dependencies to disk and have been identified as potential triggers
for exposing the vulnerability.
Of those, JGit uses the maven-dependency-plugin and the maven-javadoc-plugin.
Update them to the fixed versions reported in [2].
See the corresponding issues for the maven-dependency-plugin [3] and the
maven-javadoc-plugin [4] for details.
[1] https://snyk.io/research/zip-slip-vulnerability
[2] https://maven.apache.org/security-plexus-archiver.html
[3] https://issues.apache.org/jira/browse/MDEP-611
[4] https://issues.apache.org/jira/browse/MJAVADOC-520
Change-Id: Id3ab2d6161db240f2ab8f82298fa3ecd7a930a43
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Ensure that notifyIndexChanged is called every time we call
FileSnapshot.save, except the first.
Change-Id: I5a4e9826e791f518787366ae7c3a0ef3d416d2c1
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.0:
Teach UploadPack "filter" in protocol v2 fetch
Refactor test of capabilities output
Refactor v2 advertisement into own function
Refactor parsing of "filter" into its own method
Disallow unknown args to "fetch" in protocol v2
Teach UploadPack shallow fetch in protocol v2
Refactor unshallowCommits to local variable
Add protocol v2 support in http
Give info/refs services more control over response
Change-Id: I1683902222e076e1091795e94790a264550afb7b
Signed-off-by: Jonathan Nieder <jrn@google.com>
If the configuration variable uploadpack.allowfilter is true, advertise
that "filter" is supported, and support it if the client sends such an
argument.
Change-Id: I7de66c0a0ada46ff71c5ba124d4ffa7c47254c3b
Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
A subsequent patch will dynamically generate the capability
advertisement, so the capability advertisements produced are not always
the same. Separate the checking of the advertisements into its own test
method.
Change-Id: I768d14b9d1a244d5d886c42ffd62ef3957b518fb
Signed-off-by: Jonathan Tan <jonathantanmy@google.com>
tparker
Jonathan Nieder
David Pursehouse
Dave Borowitz
Thomas Wolf
Matthias Sohn
Michael Keppler
Marcel Trautwein
Markus Duft
Jonathan Tan