On a local non-NFS filesystem the .git/config file will be orphaned if
it is replaced by a new process while the current process is reading the
old file. The current process successfully continues to read the
orphaned file until it closes the file handle.
Since NFS servers do not keep track of open files, instead of orphaning
the old .git/config file, such a replacement on an NFS filesystem will
instead cause the old file to be garbage collected (deleted). A stale
file handle exception will be raised on NFS clients if the file is
garbage collected (deleted) on the server while it is being read. Since
we no longer have access to the old file in these cases, the previous
code would just fail. However, in these cases, reopening the file and
rereading it will succeed (since it will open the new replacement file).
Since retrying the read is a viable strategy to deal with stale file
handles on the .git/config file, implement such a strategy.
Since it is possible that the .git/config file could be replaced again
while rereading it, loop on stale file handle exceptions, up to 5 extra
times, trying to read the .git/config file again, until we either read
the new file, or find that the file no longer exists. The limit of 5 is
arbitrary, and provides a safe upper bounds to prevent infinite loops
consuming resources in a potential unforeseen persistent error
condition.
Change-Id: I6901157b9dfdbd3013360ebe3eb40af147a8c626
Signed-off-by: Nasser Grainawi <nasser@codeaurora.org>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
When running on NFS there was a chance that JGits LockFile
semantic is broken because File#createNewFile() may allow
multiple clients to create the same file in parallel. This
change provides a fix which is only used when the new config
option core.supportsAtomicCreateNewFile is set to false. The
default for this option is true. This option can only be set in the
global or the system config file. The repository config file is not
taken into account in this case.
If the config option core.supportsAtomicCreateNewFile is true
then File#createNewFile() is trusted and the behaviour doesn't
change.
But if core.supportsAtomicCreateNewFile is set to false then after
successful creation of the lock file a hardlink to that lock file is
created and the attribute nlink of the lock file is checked to be 2. If
multiple clients manage to create the same lock file nlink would be
greater than 2 showing the error.
This expensive workaround is described in
https://www.time-travellers.org/shane/papers/NFS_considered_harmful.html
section III.d) "Exclusive File Creation"
Change-Id: I3d2cc48d8eb280d5f7039eb94da37804f903be6a
Then list of packed refs was cached in RefDirectory based on mtime of
the packed-refs file. This may fail on NFS when attributes are cached.
A cached mtime of the packed-refs file could cause JGit to trust the
cached content of this file and to overlook that the file is modified.
Honor the config option trustFolderStats and always read the packed-refs
content if the option is false. By default this option is set to true
and this fix is not active.
Change-Id: I2b65cfaa8f4aba2efbf8a5e865d3f09f927e2eec
When creating a new PackFile instance it is specified whether this pack
has an associated bitmap index file or not. This information is cached
and the public method getBitmapIndex() will always assume a bitmap index
file must exist if the cached data tells so. But it may happen that the
packfiles are repacked during a gc in a different process causing the
packfile, bitmap-index and index file to be deleted. Since JGit still
has an open FileHandle on the packfile this file is not really deleted
and can still be accessed. But index and bitmap index file are deleted.
Fix getBitmapIndex() to invalidate the cached packfile instance if such
a situation occurs.
This problem showed up when a gerrit server was serving repositories
which where garbage collected with native git regularly. Fetch and
clone commands for certain repositories failed permanently after a
native git gc had deleted old bitmap index files.
Change-Id: I8e620bec74dd3f310ba42024f9a657062f868f0e
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
The cgit archive command creates a prefix (root) directory entry
in the archive file. That entry's time is set to the commit time.
This patch makes jgit's behavior consistent with with cgit:
prefix: hoge/ -> creates prefix directory "hoge/" entry.
prefix: hoge//// -> creates prefix directory "hoge/" entry.
prefix: hoge/foo -> does not create prefix directory entry, but for
each file/directory entry, prefix is added.
Change-Id: I2610e40ce37972c5f7456fdca6337e7fb07176e5
Signed-off-by: Yasuhiro Takagi <ytakagi@bea.hi-ho.ne.jp>
When running an automatic GC on a FileRepository, when the caller
passes a NullProgressMonitor, run the GC in a background thread. Use a
thread pool of size 1 to limit the number of background threads spawned
for background gc in the same application. In the next minor release we
can make the thread pool configurable.
In some cases, the auto GC limit is lower than the true number of
unreachable loose objects, so auto GC will run after every (e.g) fetch
operation. This leads to the appearance of poor fetch performance.
Since these GCs will never make progress (until either the objects
become referenced, or the two week timeout expires), blocking on them
simply reduces throughput.
In the event that an auto GC would make progress, it's still OK if it
runs in the background. The progress will still happen.
This matches the behavior of regular git.
Git (and now jgit) uses the lock file for gc.log to prevent simultaneous
runs of background gc. Further, it writes errors to gc.log, and won't
run background gc if that file is present and recent. If gc.log is too
old (according to the config gc.logexpiry), it will be ignored.
Change-Id: I3870cadb4a0a6763feff252e6eaef99f4aa8d0df
Signed-off-by: David Turner <dturner@twosigma.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This is a workaround for
https://bugs.openjdk.java.net/browse/JDK-4666701.
Change-Id: Idd04657e8d95a841d72230f8881b6b899daadbc2
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
In the repo manifest documentation [1] the fetch attribute is marked
as "#REQUIRED".
If the fetch attribute is not specified, this would previously result in
NullPointerException. Throw a SAXException instead.
[1] https://gerrit.googlesource.com/git-repo/+/master/docs/manifest-format.txt
Change-Id: Ib8ed8cee6074fe6bf8f9ac6fc7a1664a547d2d49
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
It was already increased in 61a943e, but that was still not enough to
take into account the length of snapshot versions.
Change-Id: Ib54cec97e97042fe274b87a3a1afa9bb06c8bf19
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
This was already done for ZipFormat in 1448ec3.
Change-Id: Ie131938a3f640c68718dc793d18dd35be5c71e7c
Signed-off-by: Yasuhiro Takagi <ytakagi@bea.hi-ho.ne.jp>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
A higher limit is required to account for proper JGit version number
being sent in the UserAgent.
The version string "4.7.0.201704031717-r" is 20 characters, however
the strings used during development are shorter:
- When running from mvn, "4.7.0.qualifier" is used; 15 characters
- When running in Eclipse, "unknown" is used; 7 characters
Change-Id: I9aca2f71389a42fedce305e9078db016869c3d1a
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Jetty was downgraded on stable-4.6 which doesn't have a Bazel
build.
Change-Id: Ibeb91436169e852a4241189f80e4895b54ce3cd0
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
* stable-4.6:
Update Jetty to 9.3.17.v20170317
Revert "Update Jetty to 9.4.1.v20170120 in buck build"
Revert "Update Jetty to 9.4.1.v20170120"
Change-Id: I9193b568cce9c72da899a8f3eaaf833956438e13
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Update to the latest 9.3 version until we have a solution for bug 514336
we face with 9.4.x versions.
Change-Id: I6d8d476abe8677ce865a08099bb77330effc700a
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This works around the problems we faced with jetty 9.4.3.v20170317.
Bug: 514336
Change-Id: I7e9dd539414624d71587c55cb436b843949aa296
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* Parse the base URL in ManifestParser construction. This will signal
errors earlier.
* Simplify stripping of trailing slashes.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Change-Id: I4a86f68c9d7737f71cf20352cfe26288fbd2b463
* stable-4.6:
Only mark packfile invalid if exception signals permanent problem
Don't flag a packfile invalid if opening existing file failed
Prepare 4.5.2-SNAPSHOT builds
Change-Id: Ife4efad1135d3870a5a0fb71e60b9524fb8777ab
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-4.5:
Only mark packfile invalid if exception signals permanent problem
Don't flag a packfile invalid if opening existing file failed
Prepare 4.5.2-SNAPSHOT builds
Change-Id: I20b50981adc54c426666015ff04fe3bb1db9abd9
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Add NoPackSignatureException and UnsupportedPackVersionException to
explicitly mark permanent unrecoverable problems with a pack
Assume problem with a pack is permanent only if we are sure the
exception signals a non-transient problem we can't recover from:
- AccessDeniedException: we lack permissions
- CorruptObjectException: we detected corruption
- EOFException: file ended unexpectedly
- NoPackSignatureException: pack has no pack signature
- NoSuchFileException: file has gone missing
- PackMismatchException: pack no longer matches its index
- UnpackException: unpacking failed
- UnsupportedPackIndexVersionException: unsupported pack index version
- UnsupportedPackVersionException: unsupported pack version
Do not attempt to handle Errors since they are thrown for serious
problems applications should not try to recover from.
Change-Id: I2c416ce2b0e23255c4fb03a3f9a0ee237f7a484a
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This is required since we now use AbstractLoginService which was
introduced in Jetty 9.4.0.
Change-Id: Iee6e4ae456123099f7a99cc53c5ae02fd43bfa46
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
A packfile random file open operation may fail with a
FileNotFoundException even if the file exists, possibly
for the temporary lack of resources.
Instead of managing the FileNotFoundException as any generic
IOException it is best to rethrow the exception but prevent
the packfile for being flagged as invalid until it is actually
opened and read successfully or unsuccessfully.
Bug: 514170
Change-Id: Ie37edba2df77052bceafc0b314fd1d487544bf35
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add a new API method to set the recurse mode, and pass the mode into
the fetch command.
Extend the existing FetchCommandRecurseSubmodulesTest to also perform
the same tests for fetch. Rename the test class accordingly.
Change-Id: I12553af47774b4778f7011e1018bd575a7909bd0
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Matthias Sohn
Nasser Grainawi
Christian Halstrick
Yasuhiro Takagi
David Turner
Han-Wen Nienhuys
David Pursehouse
Luca Milanesio