Null-annotated Ref class and fixed related compiler errors

This change fixes all compiler errors in JGit and replaces possible
NPE's with either appropriate exceptions, avoiding multiple "Nullable
return" method calls or early returning from the method.

Change-Id: I24c8a600ec962d61d5f40abf73eac4203e115240
Signed-off-by: Andrey Loskutov <loskutov@gmx.de>

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/Merge.java

@@ -148,9 +148,12 @@ class Merge extends TextBuiltin {
 			break;
 		case FAST_FORWARD:
 			ObjectId oldHeadId = oldHead.getObjectId();
-			outw.println(MessageFormat.format(CLIText.get().updating, oldHeadId
+			if (oldHeadId != null) {
-					.abbreviate(7).name(), result.getNewHead().abbreviate(7)
+				String oldId = oldHeadId.abbreviate(7).name();
-					.name()));
+				String newId = result.getNewHead().abbreviate(7).name();
+				outw.println(MessageFormat.format(CLIText.get().updating, oldId,
+						newId));
+			}
 			outw.println(result.getMergeStatus().toString());
 			break;
 		case CHECKOUT_CONFLICT:

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/RevParse.java

@@ -74,7 +74,13 @@ class RevParse extends TextBuiltin {
 		if (all) {
 			Map<String, Ref> allRefs = db.getRefDatabase().getRefs(ALL);
 			for (final Ref r : allRefs.values()) {
-				outw.println(r.getObjectId().name());
+				ObjectId objectId = r.getObjectId();
+				// getRefs skips dangling symrefs, so objectId should never be
+				// null.
+				if (objectId == null) {
+					throw new NullPointerException();
+				}
+				outw.println(objectId.name());
 			}
 		} else {
 			if (verify && commits.size() > 1) {

org.eclipse.jgit/resources/org/eclipse/jgit/internal/JGitText.properties

@@ -99,6 +99,7 @@ cannotSquashFixupWithoutPreviousCommit=Cannot {0} without previous commit.
 cannotStoreObjects=cannot store objects
 cannotResolveUniquelyAbbrevObjectId=Could not resolve uniquely the abbreviated object ID
 cannotUnloadAModifiedTree=Cannot unload a modified tree.
+cannotUpdateUnbornBranch=Cannot update unborn branch
 cannotWorkWithOtherStagesThanZeroRightNow=Cannot work with other stages than zero right now. Won't write corrupt index.
 cannotWriteObjectsPath=Cannot write {0}/{1}: {2}
 canOnlyCherryPickCommitsWithOneParent=Cannot cherry-pick commit ''{0}'' because it has {1} parents, only commits with exactly one parent are supported.
@@ -595,6 +596,7 @@ transportExceptionInvalid=Invalid {0} {1}:{2}
 transportExceptionMissingAssumed=Missing assumed {0}
 transportExceptionReadRef=read {0}
 transportNeedsRepository=Transport needs repository
+transportProvidedRefWithNoObjectId=Transport provided ref {0} with no object id
 transportProtoAmazonS3=Amazon S3
 transportProtoBundleFile=Git Bundle File
 transportProtoFTP=FTP

org.eclipse.jgit/src/org/eclipse/jgit/api/CheckoutCommand.java

@@ -331,10 +331,17 @@ public class CheckoutCommand extends GitCommand<Ref> {
 	}
 
 	private String getShortBranchName(Ref headRef) {
-		if (headRef.getTarget().getName().equals(headRef.getName()))
+		if (headRef.isSymbolic()) {
-			return headRef.getTarget().getObjectId().getName();
 			return Repository.shortenRefName(headRef.getTarget().getName());
 		}
+		// Detached HEAD. Every non-symbolic ref in the ref database has an
+		// object id, so this cannot be null.
+		ObjectId id = headRef.getObjectId();
+		if (id == null) {
+			throw new NullPointerException();
+		}
+		return id.getName();
+	}
 
 	/**
 	 * Add a single slash-separated path to the list of paths to check out. To

org.eclipse.jgit/src/org/eclipse/jgit/api/CloneCommand.java

@@ -61,6 +61,7 @@ import org.eclipse.jgit.internal.JGitText;
 import org.eclipse.jgit.lib.ConfigConstants;
 import org.eclipse.jgit.lib.Constants;
 import org.eclipse.jgit.lib.NullProgressMonitor;
+import org.eclipse.jgit.lib.ObjectId;
 import org.eclipse.jgit.lib.ProgressMonitor;
 import org.eclipse.jgit.lib.Ref;
 import org.eclipse.jgit.lib.RefUpdate;
@@ -235,7 +236,7 @@ public class CloneCommand extends TransportCommand<CloneCommand, Git> {
 		}
 
 		if (head == null || head.getObjectId() == null)
-			return; // throw exception?
+			return; // TODO throw exception?
 
 		if (head.getName().startsWith(Constants.R_HEADS)) {
 			final RefUpdate newHead = clonedRepo.updateRef(Constants.HEAD);
@@ -287,20 +288,24 @@ public class CloneCommand extends TransportCommand<CloneCommand, Git> {
 
 	private Ref findBranchToCheckout(FetchResult result) {
 		final Ref idHEAD = result.getAdvertisedRef(Constants.HEAD);
-		if (idHEAD == null)
+		ObjectId headId = idHEAD != null ? idHEAD.getObjectId() : null;
+		if (headId == null) {
 			return null;
+		}
 
 		Ref master = result.getAdvertisedRef(Constants.R_HEADS
 				+ Constants.MASTER);
-		if (master != null && master.getObjectId().equals(idHEAD.getObjectId()))
+		ObjectId objectId = master != null ? master.getObjectId() : null;
+		if (headId.equals(objectId)) {
 			return master;
+		}
 
 		Ref foundBranch = null;
 		for (final Ref r : result.getAdvertisedRefs()) {
 			final String n = r.getName();
 			if (!n.startsWith(Constants.R_HEADS))
 				continue;
-			if (r.getObjectId().equals(idHEAD.getObjectId())) {
+			if (headId.equals(r.getObjectId())) {
 				foundBranch = r;
 				break;
 			}

org.eclipse.jgit/src/org/eclipse/jgit/api/RebaseCommand.java

@@ -560,6 +560,8 @@ public class RebaseCommand extends GitCommand<RebaseResult> {
 		lastStepWasForward = newHead != null;
 		if (!lastStepWasForward) {
 			ObjectId headId = getHead().getObjectId();
+			// getHead() checks for null
+			assert headId != null;
 			if (!AnyObjectId.equals(headId, newParents.get(0)))
 				checkoutCommit(headId.getName(), newParents.get(0));
 
@@ -674,6 +676,8 @@ public class RebaseCommand extends GitCommand<RebaseResult> {
 			return;
 
 		ObjectId headId = getHead().getObjectId();
+		// getHead() checks for null
+		assert headId != null;
 		String head = headId.getName();
 		String currentCommits = rebaseState.readFile(CURRENT_COMMIT);
 		for (String current : currentCommits.split("\n")) //$NON-NLS-1$
@@ -1073,11 +1077,12 @@ public class RebaseCommand extends GitCommand<RebaseResult> {
 
 		Ref head = getHead();
 
-		String headName = getHeadName(head);
 		ObjectId headId = head.getObjectId();
-		if (headId == null)
+		if (headId == null) {
 			throw new RefNotFoundException(MessageFormat.format(
 					JGitText.get().refNotResolved, Constants.HEAD));
+		}
+		String headName = getHeadName(head);
 		RevCommit headCommit = walk.lookupCommit(headId);
 		RevCommit upstream = walk.lookupCommit(upstreamCommit.getId());
 
@@ -1188,10 +1193,14 @@ public class RebaseCommand extends GitCommand<RebaseResult> {
 
 	private static String getHeadName(Ref head) {
 		String headName;
-		if (head.isSymbolic())
+		if (head.isSymbolic()) {
 			headName = head.getTarget().getName();
-		else
+		} else {
-			headName = head.getObjectId().getName();
+			ObjectId headId = head.getObjectId();
+			// the callers are checking this already
+			assert headId != null;
+			headName = headId.getName();
+		}
 		return headName;
 	}
 

org.eclipse.jgit/src/org/eclipse/jgit/internal/JGitText.java

@@ -158,6 +158,7 @@ public class JGitText extends TranslationBundle {
 	/***/ public String cannotStoreObjects;
 	/***/ public String cannotResolveUniquelyAbbrevObjectId;
 	/***/ public String cannotUnloadAModifiedTree;
+	/***/ public String cannotUpdateUnbornBranch;
 	/***/ public String cannotWorkWithOtherStagesThanZeroRightNow;
 	/***/ public String cannotWriteObjectsPath;
 	/***/ public String canOnlyCherryPickCommitsWithOneParent;
@@ -663,6 +664,7 @@ public class JGitText extends TranslationBundle {
 	/***/ public String transportProtoSFTP;
 	/***/ public String transportProtoSSH;
 	/***/ public String transportProtoTest;
+	/***/ public String transportProvidedRefWithNoObjectId;
 	/***/ public String transportSSHRetryInterrupt;
 	/***/ public String treeEntryAlreadyExists;
 	/***/ public String treeFilterMarkerTooManyFilters;

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/dfs/InMemoryRepository.java

@@ -334,13 +334,16 @@ public class InMemoryRepository extends DfsRepository {
 						reject(cmds);
 						return;
 					}
-				} else if (r.isSymbolic() || r.getObjectId() == null
+				} else {
-						|| !r.getObjectId().equals(c.getOldId())) {
+					ObjectId objectId = r.getObjectId();
+					if (r.isSymbolic() || objectId == null
+							|| !objectId.equals(c.getOldId())) {
 						c.setResult(ReceiveCommand.Result.LOCK_FAILURE);
 						reject(cmds);
 						return;
 					}
 				}
+			}
 
 			// Write references.
 			for (ReceiveCommand c : cmds) {

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/GC.java

@@ -67,6 +67,7 @@ import java.util.LinkedList;
 import java.util.List;
 import java.util.Map;
 import java.util.Map.Entry;
+import java.util.Objects;
 import java.util.Set;
 import java.util.TreeMap;
 
@@ -483,9 +484,10 @@ public class GC {
 				return false;
 			return r1.getTarget().getName().equals(r2.getTarget().getName());
 		} else {
-			if (r2.isSymbolic())
+			if (r2.isSymbolic()) {
 				return false;
-			return r1.getObjectId().equals(r2.getObjectId());
+			}
+			return Objects.equals(r1.getObjectId(), r2.getObjectId());
 		}
 	}
 

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/RefDirectory.java

@@ -73,6 +73,7 @@ import java.util.Map;
 import java.util.concurrent.atomic.AtomicInteger;
 import java.util.concurrent.atomic.AtomicReference;
 
+import org.eclipse.jgit.annotations.NonNull;
 import org.eclipse.jgit.errors.InvalidObjectIdException;
 import org.eclipse.jgit.errors.LockFailedException;
 import org.eclipse.jgit.errors.MissingObjectException;
@@ -715,17 +716,21 @@ public class RefDirectory extends RefDatabase {
 	 */
 	private Ref peeledPackedRef(Ref f)
 			throws MissingObjectException, IOException {
-		if (f.getStorage().isPacked() && f.isPeeled())
+		if (f.getStorage().isPacked() && f.isPeeled()) {
 			return f;
-		if (!f.isPeeled())
+		}
+		if (!f.isPeeled()) {
 			f = peel(f);
-		if (f.getPeeledObjectId() != null)
+		}
+		ObjectId peeledObjectId = f.getPeeledObjectId();
+		if (peeledObjectId != null) {
 			return new ObjectIdRef.PeeledTag(PACKED, f.getName(),
-					f.getObjectId(), f.getPeeledObjectId());
+					f.getObjectId(), peeledObjectId);
-		else
+		} else {
 			return new ObjectIdRef.PeeledNonTag(PACKED, f.getName(),
 					f.getObjectId());
 		}
+	}
 
 	void log(final RefUpdate update, final String msg, final boolean deref)
 			throws IOException {
@@ -985,7 +990,7 @@ public class RefDirectory extends RefDatabase {
 		try {
 			id = ObjectId.fromString(buf, 0);
 			if (ref != null && !ref.isSymbolic()
-					&& ref.getTarget().getObjectId().equals(id)) {
+					&& id.equals(ref.getTarget().getObjectId())) {
 				assert(currentSnapshot != null);
 				currentSnapshot.setClean(otherSnapshot);
 				return ref;
@@ -1103,8 +1108,8 @@ public class RefDirectory extends RefDatabase {
 			implements LooseRef {
 		private final FileSnapshot snapShot;
 
-		LoosePeeledTag(FileSnapshot snapshot, String refName, ObjectId id,
+		LoosePeeledTag(FileSnapshot snapshot, @NonNull String refName,
-				ObjectId p) {
+				@NonNull ObjectId id, @NonNull ObjectId p) {
 			super(LOOSE, refName, id, p);
 			this.snapShot = snapshot;
 		}
@@ -1122,7 +1127,8 @@ public class RefDirectory extends RefDatabase {
 			implements LooseRef {
 		private final FileSnapshot snapShot;
 
-		LooseNonTag(FileSnapshot snapshot, String refName, ObjectId id) {
+		LooseNonTag(FileSnapshot snapshot, @NonNull String refName,
+				@NonNull ObjectId id) {
 			super(LOOSE, refName, id);
 			this.snapShot = snapshot;
 		}
@@ -1140,7 +1146,8 @@ public class RefDirectory extends RefDatabase {
 			implements LooseRef {
 		private FileSnapshot snapShot;
 
-		LooseUnpeeled(FileSnapshot snapShot, String refName, ObjectId id) {
+		LooseUnpeeled(FileSnapshot snapShot, @NonNull String refName,
+				@NonNull ObjectId id) {
 			super(LOOSE, refName, id);
 			this.snapShot = snapShot;
 		}
@@ -1149,13 +1156,24 @@ public class RefDirectory extends RefDatabase {
 			return snapShot;
 		}
 
+		@NonNull
+		@Override
+		public ObjectId getObjectId() {
+			ObjectId id = super.getObjectId();
+			assert id != null; // checked in constructor
+			return id;
+		}
+
 		public LooseRef peel(ObjectIdRef newLeaf) {
-			if (newLeaf.getPeeledObjectId() != null)
+			ObjectId peeledObjectId = newLeaf.getPeeledObjectId();
+			ObjectId objectId = getObjectId();
+			if (peeledObjectId != null) {
 				return new LoosePeeledTag(snapShot, getName(),
-						getObjectId(), newLeaf.getPeeledObjectId());
+						objectId, peeledObjectId);
-			else
+			} else {
 				return new LooseNonTag(snapShot, getName(),
-						getObjectId());
+						objectId);
+			}
 		}
 	}
 
@@ -1163,7 +1181,8 @@ public class RefDirectory extends RefDatabase {
 			LooseRef {
 		private final FileSnapshot snapShot;
 
-		LooseSymbolicRef(FileSnapshot snapshot, String refName, Ref target) {
+		LooseSymbolicRef(FileSnapshot snapshot, @NonNull String refName,
+				@NonNull Ref target) {
 			super(refName, target);
 			this.snapShot = snapshot;
 		}

org.eclipse.jgit/src/org/eclipse/jgit/lib/ObjectIdRef.java

@@ -44,6 +44,9 @@
 
 package org.eclipse.jgit.lib;
 
+import org.eclipse.jgit.annotations.NonNull;
+import org.eclipse.jgit.annotations.Nullable;
+
 /** A {@link Ref} that points directly at an {@link ObjectId}. */
 public abstract class ObjectIdRef implements Ref {
 	/** Any reference whose peeled value is not yet known. */
@@ -56,13 +59,15 @@ public abstract class ObjectIdRef implements Ref {
 		 * @param name
 		 *            name of this ref.
 		 * @param id
-		 *            current value of the ref. May be null to indicate a ref
+		 *            current value of the ref. May be {@code null} to indicate
-		 *            that does not exist yet.
+		 *            a ref that does not exist yet.
 		 */
-		public Unpeeled(Storage st, String name, ObjectId id) {
+		public Unpeeled(@NonNull Storage st, @NonNull String name,
+				@Nullable ObjectId id) {
 			super(st, name, id);
 		}
 
+		@Nullable
 		public ObjectId getPeeledObjectId() {
 			return null;
 		}
@@ -88,11 +93,13 @@ public abstract class ObjectIdRef implements Ref {
 		 * @param p
 		 *            the first non-tag object that tag {@code id} points to.
 		 */
-		public PeeledTag(Storage st, String name, ObjectId id, ObjectId p) {
+		public PeeledTag(@NonNull Storage st, @NonNull String name,
+				@Nullable ObjectId id, @NonNull ObjectId p) {
 			super(st, name, id);
 			peeledObjectId = p;
 		}
 
+		@NonNull
 		public ObjectId getPeeledObjectId() {
 			return peeledObjectId;
 		}
@@ -112,13 +119,15 @@ public abstract class ObjectIdRef implements Ref {
 		 * @param name
 		 *            name of this ref.
 		 * @param id
-		 *            current value of the ref. May be null to indicate a ref
+		 *            current value of the ref. May be {@code null} to indicate
-		 *            that does not exist yet.
+		 *            a ref that does not exist yet.
 		 */
-		public PeeledNonTag(Storage st, String name, ObjectId id) {
+		public PeeledNonTag(@NonNull Storage st, @NonNull String name,
+				@Nullable ObjectId id) {
 			super(st, name, id);
 		}
 
+		@Nullable
 		public ObjectId getPeeledObjectId() {
 			return null;
 		}
@@ -142,15 +151,17 @@ public abstract class ObjectIdRef implements Ref {
 	 * @param name
 	 *            name of this ref.
 	 * @param id
-	 *            current value of the ref. May be null to indicate a ref that
+	 *            current value of the ref. May be {@code null} to indicate a
-	 *            does not exist yet.
+	 *            ref that does not exist yet.
 	 */
-	protected ObjectIdRef(Storage st, String name, ObjectId id) {
+	protected ObjectIdRef(@NonNull Storage st, @NonNull String name,
+			@Nullable ObjectId id) {
 		this.name = name;
 		this.storage = st;
 		this.objectId = id;
 	}
 
+	@NonNull
 	public String getName() {
 		return name;
 	}
@@ -159,22 +170,27 @@ public abstract class ObjectIdRef implements Ref {
 		return false;
 	}
 
+	@NonNull
 	public Ref getLeaf() {
 		return this;
 	}
 
+	@NonNull
 	public Ref getTarget() {
 		return this;
 	}
 
+	@Nullable
 	public ObjectId getObjectId() {
 		return objectId;
 	}
 
+	@NonNull
 	public Storage getStorage() {
 		return storage;
 	}
 
+	@NonNull
 	@Override
 	public String toString() {
 		StringBuilder r = new StringBuilder();

org.eclipse.jgit/src/org/eclipse/jgit/lib/Ref.java

@@ -43,6 +43,9 @@
 
 package org.eclipse.jgit.lib;
 
+import org.eclipse.jgit.annotations.NonNull;
+import org.eclipse.jgit.annotations.Nullable;
+
 /**
  * Pairing of a name and the {@link ObjectId} it currently has.
  * <p>
@@ -126,6 +129,7 @@ public interface Ref {
 	 *
 	 * @return name of this ref.
 	 */
+	@NonNull
 	public String getName();
 
 	/**
@@ -156,6 +160,7 @@ public interface Ref {
 	 *
 	 * @return the reference that actually stores the ObjectId value.
 	 */
+	@NonNull
 	public abstract Ref getLeaf();
 
 	/**
@@ -170,22 +175,27 @@ public interface Ref {
 	 *
 	 * @return the target reference, or {@code this}.
 	 */
+	@NonNull
 	public abstract Ref getTarget();
 
 	/**
 	 * Cached value of this ref.
 	 *
-	 * @return the value of this ref at the last time we read it.
+	 * @return the value of this ref at the last time we read it. May be
+	 *         {@code null} to indicate a ref that does not exist yet or a
+	 *         symbolic ref pointing to an unborn branch.
 	 */
+	@Nullable
 	public abstract ObjectId getObjectId();
 
 	/**
 	 * Cached value of <code>ref^{}</code> (the ref peeled to commit).
 	 *
 	 * @return if this ref is an annotated tag the id of the commit (or tree or
-	 *         blob) that the annotated tag refers to; null if this ref does not
+	 *         blob) that the annotated tag refers to; {@code null} if this ref
-	 *         refer to an annotated tag.
+	 *         does not refer to an annotated tag.
 	 */
+	@Nullable
 	public abstract ObjectId getPeeledObjectId();
 
 	/**
@@ -201,5 +211,6 @@ public interface Ref {
 	 *
 	 * @return type of ref.
 	 */
+	@NonNull
 	public abstract Storage getStorage();
 }

org.eclipse.jgit/src/org/eclipse/jgit/lib/RefWriter.java

@@ -119,13 +119,20 @@ public abstract class RefWriter {
 				continue;
 			}
 
-			r.getObjectId().copyTo(tmp, w);
+			ObjectId objectId = r.getObjectId();
+			if (objectId == null) {
+				// Symrefs to unborn branches aren't advertised in the info/refs
+				// file.
+				continue;
+			}
+			objectId.copyTo(tmp, w);
 			w.write('\t');
 			w.write(r.getName());
 			w.write('\n');
 
-			if (r.getPeeledObjectId() != null) {
+			ObjectId peeledObjectId = r.getPeeledObjectId();
-				r.getPeeledObjectId().copyTo(tmp, w);
+			if (peeledObjectId != null) {
+				peeledObjectId.copyTo(tmp, w);
 				w.write('\t');
 				w.write(r.getName());
 				w.write("^{}\n"); //$NON-NLS-1$
@@ -167,14 +174,21 @@ public abstract class RefWriter {
 			if (r.getStorage() != Ref.Storage.PACKED)
 				continue;
 
-			r.getObjectId().copyTo(tmp, w);
+			ObjectId objectId = r.getObjectId();
+			if (objectId == null) {
+				// A packed ref cannot be a symref, let alone a symref
+				// to an unborn branch.
+				throw new NullPointerException();
+			}
+			objectId.copyTo(tmp, w);
 			w.write(' ');
 			w.write(r.getName());
 			w.write('\n');
 
-			if (r.getPeeledObjectId() != null) {
+			ObjectId peeledObjectId = r.getPeeledObjectId();
+			if (peeledObjectId != null) {
 				w.write('^');
-				r.getPeeledObjectId().copyTo(tmp, w);
+				peeledObjectId.copyTo(tmp, w);
 				w.write('\n');
 			}
 		}

org.eclipse.jgit/src/org/eclipse/jgit/lib/Repository.java

@@ -911,12 +911,16 @@ public abstract class Repository implements AutoCloseable {
 	@Nullable
 	public String getFullBranch() throws IOException {
 		Ref head = getRef(Constants.HEAD);
-		if (head == null)
+		if (head == null) {
 			return null;
-		if (head.isSymbolic())
+		}
+		if (head.isSymbolic()) {
 			return head.getTarget().getName();
-		if (head.getObjectId() != null)
+		}
-			return head.getObjectId().name();
+		ObjectId objectId = head.getObjectId();
+		if (objectId != null) {
+			return objectId.name();
+		}
 		return null;
 	}
 

org.eclipse.jgit/src/org/eclipse/jgit/lib/SymbolicRef.java

@@ -43,6 +43,9 @@
 
 package org.eclipse.jgit.lib;
 
+import org.eclipse.jgit.annotations.NonNull;
+import org.eclipse.jgit.annotations.Nullable;
+
 /**
  * A reference that indirectly points at another {@link Ref}.
  * <p>
@@ -62,11 +65,12 @@ public class SymbolicRef implements Ref {
 	 * @param target
 	 *            the ref we reference and derive our value from.
 	 */
-	public SymbolicRef(String refName, Ref target) {
+	public SymbolicRef(@NonNull String refName, @NonNull Ref target) {
 		this.name = refName;
 		this.target = target;
 	}
 
+	@NonNull
 	public String getName() {
 		return name;
 	}
@@ -75,6 +79,7 @@ public class SymbolicRef implements Ref {
 		return true;
 	}
 
+	@NonNull
 	public Ref getLeaf() {
 		Ref dst = getTarget();
 		while (dst.isSymbolic())
@@ -82,18 +87,22 @@ public class SymbolicRef implements Ref {
 		return dst;
 	}
 
+	@NonNull
 	public Ref getTarget() {
 		return target;
 	}
 
+	@Nullable
 	public ObjectId getObjectId() {
 		return getLeaf().getObjectId();
 	}
 
+	@NonNull
 	public Storage getStorage() {
 		return Storage.LOOSE;
 	}
 
+	@Nullable
 	public ObjectId getPeeledObjectId() {
 		return getLeaf().getPeeledObjectId();
 	}

org.eclipse.jgit/src/org/eclipse/jgit/merge/MergeMessageFormatter.java

@@ -46,6 +46,7 @@ import java.util.ArrayList;
 import java.util.List;
 
 import org.eclipse.jgit.lib.Constants;
+import org.eclipse.jgit.lib.ObjectId;
 import org.eclipse.jgit.lib.Ref;
 import org.eclipse.jgit.lib.Repository;
 import org.eclipse.jgit.util.ChangeIdUtil;
@@ -76,23 +77,23 @@ public class MergeMessageFormatter {
 		List<String> commits = new ArrayList<String>();
 		List<String> others = new ArrayList<String>();
 		for (Ref ref : refsToMerge) {
-			if (ref.getName().startsWith(Constants.R_HEADS))
+			if (ref.getName().startsWith(Constants.R_HEADS)) {
 				branches.add("'" + Repository.shortenRefName(ref.getName()) //$NON-NLS-1$
 						+ "'"); //$NON-NLS-1$
-
+			} else if (ref.getName().startsWith(Constants.R_REMOTES)) {
-			else if (ref.getName().startsWith(Constants.R_REMOTES))
 				remoteBranches.add("'" //$NON-NLS-1$
 						+ Repository.shortenRefName(ref.getName()) + "'"); //$NON-NLS-1$
-
+			} else if (ref.getName().startsWith(Constants.R_TAGS)) {
-			else if (ref.getName().startsWith(Constants.R_TAGS))
 				tags.add("'" + Repository.shortenRefName(ref.getName()) + "'"); //$NON-NLS-1$ //$NON-NLS-2$
-
+			} else {
-			else if (ref.getName().equals(ref.getObjectId().getName()))
+				ObjectId objectId = ref.getObjectId();
+				if (objectId != null && ref.getName().equals(objectId.getName())) {
 					commits.add("'" + ref.getName() + "'"); //$NON-NLS-1$ //$NON-NLS-2$
-
+				} else {
-			else
 					others.add(ref.getName());
 				}
+			}
+		}
 
 		List<String> listings = new ArrayList<String>();
 

org.eclipse.jgit/src/org/eclipse/jgit/transport/BasePackFetchConnection.java

@@ -464,8 +464,12 @@ public abstract class BasePackFetchConnection extends BasePackConnection
 		final PacketLineOut p = statelessRPC ? pckState : pckOut;
 		boolean first = true;
 		for (final Ref r : want) {
+			ObjectId objectId = r.getObjectId();
+			if (objectId == null) {
+				continue;
+			}
 			try {
-				if (walk.parseAny(r.getObjectId()).has(REACHABLE)) {
+				if (walk.parseAny(objectId).has(REACHABLE)) {
 					// We already have this object. Asking for it is
 					// not a very good idea.
 					//
@@ -478,7 +482,7 @@ public abstract class BasePackFetchConnection extends BasePackConnection
 
 			final StringBuilder line = new StringBuilder(46);
 			line.append("want "); //$NON-NLS-1$
-			line.append(r.getObjectId().name());
+			line.append(objectId.name());
 			if (first) {
 				line.append(enableCapabilities());
 				first = false;

org.eclipse.jgit/src/org/eclipse/jgit/transport/BasePackPushConnection.java

@@ -239,8 +239,11 @@ public abstract class BasePackPushConnection extends BasePackConnection implemen
 			final StringBuilder sb = new StringBuilder();
 			ObjectId oldId = rru.getExpectedOldObjectId();
 			if (oldId == null) {
-				Ref adv = getRef(rru.getRemoteName());
+				final Ref advertised = getRef(rru.getRemoteName());
-				oldId = adv != null ? adv.getObjectId() : ObjectId.zeroId();
+				oldId = advertised != null ? advertised.getObjectId() : null;
+				if (oldId == null) {
+					oldId = ObjectId.zeroId();
+				}
 			}
 			sb.append(oldId.name());
 			sb.append(' ');

org.eclipse.jgit/src/org/eclipse/jgit/transport/BaseReceivePack.java

@@ -1372,9 +1372,13 @@ public abstract class BaseReceivePack {
 				}
 			}
 
-			if (cmd.getType() == ReceiveCommand.Type.DELETE && ref != null
+			if (cmd.getType() == ReceiveCommand.Type.DELETE && ref != null) {
-					&& !ObjectId.zeroId().equals(cmd.getOldId())
+				ObjectId id = ref.getObjectId();
-					&& !ref.getObjectId().equals(cmd.getOldId())) {
+				if (id == null) {
+					id = ObjectId.zeroId();
+				}
+				if (!ObjectId.zeroId().equals(cmd.getOldId())
+						&& !id.equals(cmd.getOldId())) {
 					// Delete commands can be sent with the old id matching our
 					// advertised value, *OR* with the old id being 0{40}. Any
 					// other requested old id is invalid.
@@ -1383,6 +1387,7 @@ public abstract class BaseReceivePack {
 							JGitText.get().invalidOldIdSent);
 					continue;
 				}
+			}
 
 			if (cmd.getType() == ReceiveCommand.Type.UPDATE) {
 				if (ref == null) {
@@ -1391,8 +1396,15 @@ public abstract class BaseReceivePack {
 					cmd.setResult(Result.REJECTED_OTHER_REASON, JGitText.get().noSuchRef);
 					continue;
 				}
+				ObjectId id = ref.getObjectId();
+				if (id == null) {
+					// We cannot update unborn branch
+					cmd.setResult(Result.REJECTED_OTHER_REASON,
+							JGitText.get().cannotUpdateUnbornBranch);
+					continue;
+				}
 
-				if (!ref.getObjectId().equals(cmd.getOldId())) {
+				if (!id.equals(cmd.getOldId())) {
 					// A properly functioning client will send the same
 					// object id we advertised.
 					//

org.eclipse.jgit/src/org/eclipse/jgit/transport/FetchProcess.java

@@ -397,13 +397,19 @@ class FetchProcess {
 	private void expandFetchTags() throws TransportException {
 		final Map<String, Ref> haveRefs = localRefs();
 		for (final Ref r : conn.getRefs()) {
-			if (!isTag(r))
+			if (!isTag(r)) {
+				continue;
+			}
+			ObjectId id = r.getObjectId();
+			if (id == null) {
 				continue;
+			}
 			final Ref local = haveRefs.get(r.getName());
-			if (local == null || !r.getObjectId().equals(local.getObjectId()))
+			if (local == null || !id.equals(local.getObjectId())) {
 				wantTag(r);
 			}
 		}
+	}
 
 	private void wantTag(final Ref r) throws TransportException {
 		want(r, new RefSpec().setSource(r.getName())
@@ -413,6 +419,11 @@ class FetchProcess {
 	private void want(final Ref src, final RefSpec spec)
 			throws TransportException {
 		final ObjectId newId = src.getObjectId();
+		if (newId == null) {
+			throw new NullPointerException(MessageFormat.format(
+					JGitText.get().transportProvidedRefWithNoObjectId,
+					src.getName()));
+		}
 		if (spec.getDestination() != null) {
 			final TrackingRefUpdate tru = createUpdate(spec, newId);
 			if (newId.equals(tru.getOldObjectId()))

org.eclipse.jgit/src/org/eclipse/jgit/transport/PushProcess.java

@@ -188,8 +188,13 @@ class PushProcess {
 		final Map<String, RemoteRefUpdate> result = new HashMap<String, RemoteRefUpdate>();
 		for (final RemoteRefUpdate rru : toPush.values()) {
 			final Ref advertisedRef = connection.getRef(rru.getRemoteName());
-			final ObjectId advertisedOld = (advertisedRef == null ? ObjectId
+			ObjectId advertisedOld = null;
-					.zeroId() : advertisedRef.getObjectId());
+			if (advertisedRef != null) {
+				advertisedOld = advertisedRef.getObjectId();
+			}
+			if (advertisedOld == null) {
+				advertisedOld = ObjectId.zeroId();
+			}
 
 			if (rru.getNewObjectId().equals(advertisedOld)) {
 				if (rru.isDelete()) {

org.eclipse.jgit/src/org/eclipse/jgit/transport/WalkFetchConnection.java

@@ -267,6 +267,10 @@ class WalkFetchConnection extends BaseFetchConnection {
 		final HashSet<ObjectId> inWorkQueue = new HashSet<ObjectId>();
 		for (final Ref r : want) {
 			final ObjectId id = r.getObjectId();
+			if (id == null) {
+				throw new NullPointerException(MessageFormat.format(
+						JGitText.get().transportProvidedRefWithNoObjectId, r.getName()));
+			}
 			try {
 				final RevObject obj = revWalk.parseAny(id);
 				if (obj.has(COMPLETE))