Merge branch 'stable-4.2'

* stable-4.2:
  Don't use deprecated LockFile constructor
  Fix warnings about unchecked conversion of MergeResult
  MockServletConfig: Fix warning about unchecked conversion of Enumeration
  HugeFileTest: Make Git a class member and open in try-with-resource
  Suppress "unchecked cast" warnings related to UploadPackFactory.DISABLED
  DiffAlgorithms: Fix warnings about variable hiding
  DirCacheBasicTest: Open ObjectInserter.Formatter in try-with-resource
  DirCacheBuilderIteratorTest: Open TreeWalk in try-with-resource
  DirCacheCGitCompatabilityTest: Open TreeWalk in try-with-resource
  DirCacheCheckoutMaliciousPathTest: Open Git and RevWalk in t-w-r
  DirCacheIteratorTest: Open TreeWalk instances in try-with-resource
  ForPathTest: Open TreeWalk in try-with-resource
  GitConstructionTest: Open Git instance in try-with-resource
  IndexDiffTest: Open Git instances in try-with-resources
  ManifestParserTest: Don't use deprecated StringBufferInputStream
  InMemoryRepository: Remove unused RevWalk from batch method signature
  IndexModificationTimesTest: Open Git instances in try-with-resource
  InterIndexDiffFilterTest: Open TreeWalk in try-with-resource
  LockFileTest: Open Git instance in try-with-resource
  JGit v4.1.2.201602141800-r
  MergeCommandTest: Use JUnit's assume to check preconditions
  MergeCommandTest: Open Git instances in try-with-resource

Change-Id: Ie5dba6b9132a29e86958a04fa2b76465bcd2c6b5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>

org.eclipse.jgit.http.test/tst/org/eclipse/jgit/http/test/DefaultReceivePackFactoryTest.java

@@ -79,6 +79,7 @@ public class DefaultReceivePackFactoryTest extends LocalDiskRepositoryTestCase {
 		factory = new DefaultReceivePackFactory();
 	}
 
+	@SuppressWarnings("unchecked")
 	@Test
 	public void testDisabledSingleton() throws ServiceNotAuthorizedException {
 		factory = (ReceivePackFactory<HttpServletRequest>) ReceivePackFactory.DISABLED;

org.eclipse.jgit.http.test/tst/org/eclipse/jgit/http/test/DefaultUploadPackFactoryTest.java

@@ -77,6 +77,7 @@ public class DefaultUploadPackFactoryTest extends LocalDiskRepositoryTestCase {
 		factory = new DefaultUploadPackFactory();
 	}
 
+	@SuppressWarnings("unchecked")
 	@Test
 	public void testDisabledSingleton() throws ServiceNotAuthorizedException {
 		factory = (UploadPackFactory<HttpServletRequest>) UploadPackFactory.DISABLED;

org.eclipse.jgit.junit.http/src/org/eclipse/jgit/junit/http/MockServletConfig.java

@@ -62,7 +62,7 @@ public class MockServletConfig implements ServletConfig {
 		return parameters.get(name);
 	}
 
-	public Enumeration getInitParameterNames() {
+	public Enumeration<String> getInitParameterNames() {
 		final Iterator<String> i = parameters.keySet().iterator();
 		return new Enumeration<String>() {
 			public boolean hasMoreElements() {

org.eclipse.jgit.junit/src/org/eclipse/jgit/junit/TestRepository.java

@@ -905,7 +905,7 @@ public class TestRepository<R extends Repository> {
 
 	private void writeFile(final File p, final byte[] bin) throws IOException,
 			ObjectWritingException {
-		final LockFile lck = new LockFile(p, db.getFS());
+		final LockFile lck = new LockFile(p);
 		if (!lck.lock())
 			throw new ObjectWritingException("Can't write " + p);
 		try {

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/debug/DiffAlgorithms.java

@@ -155,16 +155,16 @@ class DiffAlgorithms extends TextBuiltin {
 			else
 				rb.findGitDir(dir);
 
-			Repository db = rb.build();
+			Repository repo = rb.build();
 			try {
-				run(db);
+				run(repo);
 			} finally {
-				db.close();
+				repo.close();
 			}
 		}
 	}
 
-	private void run(Repository db) throws Exception {
+	private void run(Repository repo) throws Exception {
 		List<Test> all = init();
 
 		long files = 0;
@@ -173,14 +173,14 @@ class DiffAlgorithms extends TextBuiltin {
 		int maxN = 0;
 
 		AbbreviatedObjectId startId;
-		try (ObjectReader or = db.newObjectReader();
+		try (ObjectReader or = repo.newObjectReader();
 			RevWalk rw = new RevWalk(or)) {
 			final MutableObjectId id = new MutableObjectId();
 			TreeWalk tw = new TreeWalk(or);
 			tw.setFilter(TreeFilter.ANY_DIFF);
 			tw.setRecursive(true);
 
-			ObjectId start = db.resolve(Constants.HEAD);
+			ObjectId start = repo.resolve(Constants.HEAD);
 			startId = or.abbreviate(start);
 			rw.markStart(rw.parseCommit(start));
 			for (;;) {
@@ -235,14 +235,15 @@ class DiffAlgorithms extends TextBuiltin {
 
 		Collections.sort(all, new Comparator<Test>() {
 			public int compare(Test a, Test b) {
-				int cmp = Long.signum(a.runningTimeNanos - b.runningTimeNanos);
+				int result = Long.signum(a.runningTimeNanos - b.runningTimeNanos);
-				if (cmp == 0)
+				if (result == 0) {
-					cmp = a.algorithm.name.compareTo(b.algorithm.name);
+					result = a.algorithm.name.compareTo(b.algorithm.name);
-				return cmp;
+				}
+				return result;
 			}
 		});
 
-		File directory = db.getDirectory();
+		File directory = repo.getDirectory();
 		if (directory != null) {
 			String name = directory.getName();
 			File parent = directory.getParentFile();

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/debug/RebuildCommitGraph.java

@@ -235,7 +235,7 @@ class RebuildCommitGraph extends TextBuiltin {
 		final ObjectId id = db.resolve(Constants.HEAD);
 		if (!ObjectId.isId(head) && id != null) {
 			final LockFile lf;
-			lf = new LockFile(new File(db.getDirectory(), Constants.HEAD), db.getFS());
+			lf = new LockFile(new File(db.getDirectory(), Constants.HEAD));
 			if (!lf.lock())
 				throw new IOException(MessageFormat.format(CLIText.get().cannotLock, Constants.HEAD));
 			lf.write(id);
@@ -263,7 +263,7 @@ class RebuildCommitGraph extends TextBuiltin {
 			protected void writeFile(final String name, final byte[] content)
 					throws IOException {
 				final File file = new File(db.getDirectory(), name);
-				final LockFile lck = new LockFile(file, db.getFS());
+				final LockFile lck = new LockFile(file);
 				if (!lck.lock())
 					throw new ObjectWritingException(MessageFormat.format(CLIText.get().cantWrite, file));
 				try {

org.eclipse.jgit.test/tst/org/eclipse/jgit/api/GitConstructionTest.java

@@ -66,11 +66,12 @@ public class GitConstructionTest extends RepositoryTestCase {
 	@Before
 	public void setUp() throws Exception {
 		super.setUp();
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.commit().setMessage("initial commit").call();
 			writeTrashFile("Test.txt", "Hello world");
 			git.add().addFilepattern("Test.txt").call();
 			git.commit().setMessage("Initial commit").call();
+		}
 
 		bareRepo = Git.cloneRepository().setBare(true)
 				.setURI(db.getDirectory().toURI().toString())

org.eclipse.jgit.test/tst/org/eclipse/jgit/api/HugeFileTest.java

@@ -51,6 +51,8 @@ import java.util.Collection;
 
 import org.eclipse.jgit.api.ResetCommand.ResetType;
 import org.eclipse.jgit.junit.RepositoryTestCase;
+import org.junit.After;
+import org.junit.Before;
 import org.junit.Ignore;
 import org.junit.Test;
 
@@ -60,12 +62,26 @@ public class HugeFileTest extends RepositoryTestCase {
 
 	private long lastt = t;
 
+	private Git git;
+
 	private void measure(String name) {
 		long c = System.currentTimeMillis();
 		System.out.println(name + ", dt=" + (c - lastt) / 1000.0 + "s");
 		lastt = c;
 	}
 
+	@Before
+	public void before() {
+		git = new Git(db);
+	}
+
+	@After
+	public void after() {
+		if (git != null) {
+			git.close();
+		}
+	}
+
 	@Ignore("Test takes way too long (~10 minutes) to be part of the standard suite")
 	@Test
 	public void testAddHugeFile() throws Exception {
@@ -75,7 +91,6 @@ public class HugeFileTest extends RepositoryTestCase {
 		rf.setLength(4429185024L);
 		rf.close();
 		measure("Created file");
-		Git git = new Git(db);
 
 		git.add().addFilepattern("a.txt").call();
 		measure("Added file");

org.eclipse.jgit.test/tst/org/eclipse/jgit/api/MergeCommandTest.java

@@ -50,6 +50,7 @@ import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertNull;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+import static org.junit.Assume.assumeTrue;
 
 import java.io.File;
 import java.util.Iterator;
@@ -96,11 +97,12 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testMergeInItself() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.commit().setMessage("initial commit").call();
 
 			MergeResult result = git.merge().include(db.exactRef(Constants.HEAD)).call();
 			assertEquals(MergeResult.MergeStatus.ALREADY_UP_TO_DATE, result.getMergeStatus());
+		}
 		// no reflog entry written by merge
 		assertEquals("commit (initial): initial commit",
 				db
@@ -112,7 +114,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testAlreadyUpToDate() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit first = git.commit().setMessage("initial commit").call();
 			createBranch(first, "refs/heads/branch1");
 
@@ -120,6 +122,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			MergeResult result = git.merge().include(db.exactRef("refs/heads/branch1")).call();
 			assertEquals(MergeResult.MergeStatus.ALREADY_UP_TO_DATE, result.getMergeStatus());
 			assertEquals(second, result.getNewHead());
+		}
 		// no reflog entry written by merge
 		assertEquals("commit: second commit", db
 				.getReflogReader(Constants.HEAD).getLastEntry().getComment());
@@ -129,7 +132,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testFastForward() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit first = git.commit().setMessage("initial commit").call();
 			createBranch(first, "refs/heads/branch1");
 
@@ -141,6 +144,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(MergeResult.MergeStatus.FAST_FORWARD, result.getMergeStatus());
 			assertEquals(second, result.getNewHead());
+		}
 		assertEquals("merge refs/heads/master: Fast-forward",
 				db.getReflogReader(Constants.HEAD).getLastEntry().getComment());
 		assertEquals("merge refs/heads/master: Fast-forward",
@@ -149,7 +153,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testFastForwardNoCommit() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit first = git.commit().setMessage("initial commit").call();
 			createBranch(first, "refs/heads/branch1");
 
@@ -163,6 +167,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(MergeResult.MergeStatus.FAST_FORWARD,
 					result.getMergeStatus());
 			assertEquals(second, result.getNewHead());
+		}
 		assertEquals("merge refs/heads/master: Fast-forward", db
 				.getReflogReader(Constants.HEAD).getLastEntry().getComment());
 		assertEquals("merge refs/heads/master: Fast-forward", db
@@ -171,8 +176,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testFastForwardWithFiles() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("file1", "file1");
 			git.add().addFilepattern("file1").call();
 			RevCommit first = git.commit().setMessage("initial commit").call();
@@ -194,6 +198,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertTrue(new File(db.getWorkTree(), "file2").exists());
 			assertEquals(MergeResult.MergeStatus.FAST_FORWARD, result.getMergeStatus());
 			assertEquals(second, result.getNewHead());
+		}
 		assertEquals("merge refs/heads/master: Fast-forward",
 				db.getReflogReader(Constants.HEAD).getLastEntry().getComment());
 		assertEquals("merge refs/heads/master: Fast-forward",
@@ -202,8 +207,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testMultipleHeads() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("file1", "file1");
 			git.add().addFilepattern("file1").call();
 			RevCommit first = git.commit().setMessage("initial commit").call();
@@ -231,12 +235,12 @@ public class MergeCommandTest extends RepositoryTestCase {
 				// expected this exception
 			}
 		}
+	}
 
 	@Theory
 	public void testMergeSuccessAllStrategies(MergeStrategy mergeStrategy)
 			throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			RevCommit first = git.commit().setMessage("first").call();
 			createBranch(first, "refs/heads/side");
 
@@ -252,6 +256,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			MergeResult result = git.merge().setStrategy(mergeStrategy)
 					.include(db.exactRef(R_HEADS + MASTER)).call();
 			assertEquals(MergeStatus.MERGED, result.getMergeStatus());
+		}
 		assertEquals(
 				"merge refs/heads/master: Merge made by "
 						+ mergeStrategy.getName() + ".",
@@ -265,8 +270,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 	@Theory
 	public void testMergeSuccessAllStrategiesNoCommit(
 			MergeStrategy mergeStrategy) throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			RevCommit first = git.commit().setMessage("first").call();
 			createBranch(first, "refs/heads/side");
 
@@ -286,11 +290,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(db.exactRef(Constants.HEAD).getTarget().getObjectId(),
 					thirdCommit.getId());
 		}
+	}
 
 	@Test
 	public void testContentMerge() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("c/c/c", "1\nc\n3\n");
@@ -331,11 +335,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(RepositoryState.MERGING, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testMergeTag() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "a");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -358,11 +362,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			MergeResult result = git.merge().include(tag).setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.MERGED, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testMergeMessage() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -387,13 +391,13 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals("Merge branch 'side'\n\nConflicts:\n\ta\n",
 					db.readMergeCommitMsg());
+		}
 
 	}
 
 	@Test
 	public void testMergeNonVersionedPaths() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("c/c/c", "1\nc\n3\n");
@@ -440,11 +444,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(RepositoryState.MERGING, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testMultipleCreations() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -466,11 +470,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 					.setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.CONFLICTING, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testMultipleCreationsSameContent() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -501,11 +505,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 					.getReflogReader(db.getBranch())
 					.getLastEntry().getComment());
 		}
+	}
 
 	@Test
 	public void testSuccessfulContentMerge() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("c/c/c", "1\nc\n3\n");
@@ -559,11 +563,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(RepositoryState.SAFE, db.getRepositoryState());
 			// test index state
 		}
+	}
 
 	@Test
 	public void testSuccessfulContentMergeNoCommit() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("c/c/c", "1\nc\n3\n");
@@ -609,12 +613,12 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertNull(result.getNewHead());
 			assertEquals(RepositoryState.MERGING_RESOLVED, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testSuccessfulContentMergeAndDirtyworkingTree()
 			throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("d", "1\nd\n3\n");
@@ -670,11 +674,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(RepositoryState.SAFE, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testSingleDeletion() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("d", "1\nd\n3\n");
@@ -725,11 +729,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 					read(new File(db.getWorkTree(), "c/c/c")));
 			assertEquals("1\nd\n3\n", read(new File(db.getWorkTree(), "d")));
 		}
+	}
 
 	@Test
 	public void testMultipleDeletions() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -754,11 +758,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 					.setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.MERGED, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testDeletionAndConflict() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			writeTrashFile("d", "1\nd\n3\n");
@@ -798,11 +802,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 					read(new File(db.getWorkTree(), "c/c/c")));
 			assertEquals("1\nd\n3\n", read(new File(db.getWorkTree(), "d")));
 		}
+	}
 
 	@Test
 	public void testDeletionOnMasterConflict() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -830,11 +834,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals("1\na(side)\n3\n", read(new File(db.getWorkTree(), "a")));
 			assertEquals("1\nb\n3\n", read(new File(db.getWorkTree(), "b")));
 		}
+	}
 
 	@Test
 	public void testDeletionOnSideConflict() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -864,14 +868,14 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(1, result.getConflicts().size());
 			assertEquals(3, result.getConflicts().get("a")[0].length);
 		}
+	}
 
 	@Test
 	public void testModifiedAndRenamed() throws Exception {
 		// this test is essentially the same as testDeletionOnSideConflict,
 		// however if once rename support is added this test should result in a
 		// successful merge instead of a conflict
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("x", "add x");
 			git.add().addFilepattern("x").call();
 			RevCommit initial = git.commit().setMessage("add x").call();
@@ -903,11 +907,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(1, d2Merge.getConflicts().size());
 			assertEquals(3, d2Merge.getConflicts().get("x")[0].length);
 		}
+	}
 
 	@Test
 	public void testMergeFailingWithDirtyWorkingTree() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -942,11 +946,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(RepositoryState.SAFE, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testMergeConflictFileFolder() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -981,11 +985,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(RepositoryState.MERGING, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testSuccessfulMergeFailsDueToDirtyIndex() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			File fileA = writeTrashFile("a", "a");
 			RevCommit initialCommit = addAllAndCommit(git);
 
@@ -1017,11 +1021,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			checkMergeFailedResult(result, MergeFailureReason.DIRTY_INDEX,
 					indexState, fileA);
 		}
+	}
 
 	@Test
 	public void testConflictingMergeFailsDueToDirtyIndex() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			File fileA = writeTrashFile("a", "a");
 			RevCommit initialCommit = addAllAndCommit(git);
 
@@ -1055,11 +1059,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			checkMergeFailedResult(result, MergeFailureReason.DIRTY_INDEX,
 					indexState, fileA);
 		}
+	}
 
 	@Test
 	public void testSuccessfulMergeFailsDueToDirtyWorktree() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			File fileA = writeTrashFile("a", "a");
 			RevCommit initialCommit = addAllAndCommit(git);
 
@@ -1090,11 +1094,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			checkMergeFailedResult(result, MergeFailureReason.DIRTY_WORKTREE,
 					indexState, fileA);
 		}
+	}
 
 	@Test
 	public void testConflictingMergeFailsDueToDirtyWorktree() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			File fileA = writeTrashFile("a", "a");
 			RevCommit initialCommit = addAllAndCommit(git);
 
@@ -1127,6 +1131,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			checkMergeFailedResult(result, MergeFailureReason.DIRTY_WORKTREE,
 					indexState, fileA);
 		}
+	}
 
 	@Test
 	public void testMergeRemovingFolders() throws Exception {
@@ -1143,7 +1148,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 		file = new File(folder2, "file2.txt");
 		write(file, "folder2--file2.txt");
 
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.add().addFilepattern(folder1.getName())
 					.addFilepattern(folder2.getName()).call();
 			RevCommit commit1 = git.commit().setMessage("adding folders").call();
@@ -1167,6 +1172,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertFalse(folder1.exists());
 			assertFalse(folder2.exists());
 		}
+	}
 
 	@Test
 	public void testMergeRemovingFoldersWithoutFastForward() throws Exception {
@@ -1183,7 +1189,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 		file = new File(folder2, "file2.txt");
 		write(file, "folder2--file2.txt");
 
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.add().addFilepattern(folder1.getName())
 					.addFilepattern(folder2.getName()).call();
 			RevCommit base = git.commit().setMessage("adding folders").call();
@@ -1212,14 +1218,13 @@ public class MergeCommandTest extends RepositoryTestCase {
 					result.getMergeStatus());
 			assertFalse(folder1.exists());
 		}
+	}
 
 	@Test
 	public void testFileModeMerge() throws Exception {
-		if (!FS.DETECTED.supportsExecute())
-			return;
 		// Only Java6
-		Git git = new Git(db);
+		assumeTrue(FS.DETECTED.supportsExecute());
-
+		try (Git git = new Git(db)) {
 			writeTrashFile("mergeableMode", "a");
 			setExecutable(git, "mergeableMode", false);
 			writeTrashFile("conflictingModeWithBase", "a");
@@ -1251,15 +1256,14 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertTrue(canExecute(git, "mergeableMode"));
 			assertFalse(canExecute(git, "conflictingModeNoBase"));
 		}
+	}
 
 	@Test
 	public void testFileModeMergeWithDirtyWorkTree() throws Exception {
-		if (!FS.DETECTED.supportsExecute())
-			return;
 		// Only Java6 (or set x bit in index)
+		assumeTrue(FS.DETECTED.supportsExecute());
 
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("mergeableButDirty", "a");
 			setExecutable(git, "mergeableButDirty", false);
 			RevCommit initialCommit = addAllAndCommit(git);
@@ -1284,11 +1288,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals(MergeStatus.FAILED, result.getMergeStatus());
 			assertFalse(canExecute(git, "mergeableButDirty"));
 		}
+	}
 
 	@Test
 	public void testSquashFastForward() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("file1", "file1");
 			git.add().addFilepattern("file1").call();
 			RevCommit first = git.commit().setMessage("initial commit").call();
@@ -1350,11 +1354,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			Status stat = git.status().call();
 			assertEquals(Sets.of("file2", "file3"), stat.getAdded());
 		}
+	}
 
 	@Test
 	public void testSquashMerge() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("file1", "file1");
 			git.add().addFilepattern("file1").call();
 			RevCommit first = git.commit().setMessage("initial commit").call();
@@ -1408,11 +1412,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			Status stat = git.status().call();
 			assertEquals(Sets.of("file3"), stat.getAdded());
 		}
+	}
 
 	@Test
 	public void testSquashMergeConflict() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("file1", "file1");
 			git.add().addFilepattern("file1").call();
 			RevCommit first = git.commit().setMessage("initial commit").call();
@@ -1464,10 +1468,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			Status stat = git.status().call();
 			assertEquals(Sets.of("file2"), stat.getConflicting());
 		}
+	}
 
 	@Test
 	public void testFastForwardOnly() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
 					.call();
 			createBranch(initialCommit, "refs/heads/branch1");
@@ -1481,10 +1486,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(MergeStatus.FAST_FORWARD, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testNoFastForward() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
 					.call();
 			createBranch(initialCommit, "refs/heads/branch1");
@@ -1498,11 +1504,12 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(MergeStatus.MERGED, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testNoFastForwardNoCommit() throws Exception {
 		// given
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
 					.call();
 			createBranch(initialCommit, "refs/heads/branch1");
@@ -1525,10 +1532,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertNull(result.getNewHead());
 			assertEquals(RepositoryState.MERGING_RESOLVED, db.getRepositoryState());
 		}
+	}
 
 	@Test
 	public void testFastForwardOnlyNotPossible() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
 					.call();
 			createBranch(initialCommit, "refs/heads/branch1");
@@ -1544,6 +1552,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 			assertEquals(MergeStatus.ABORTED, result.getMergeStatus());
 		}
+	}
 
 	@Test
 	public void testRecursiveMergeWithConflict() throws Exception {
@@ -1577,8 +1586,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 
 	@Test
 	public void testMergeWithMessageOption() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -1607,11 +1615,11 @@ public class MergeCommandTest extends RepositoryTestCase {
 			RevCommit newHead = it.next();
 			assertEquals("user message", newHead.getFullMessage());
 		}
+	}
 
 	@Test
 	public void testMergeConflictWithMessageOption() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -1637,6 +1645,7 @@ public class MergeCommandTest extends RepositoryTestCase {
 			assertEquals("user message\n\nConflicts:\n\ta\n",
 					db.readMergeCommitMsg());
 		}
+	}
 
 	private static void setExecutable(Git git, String path, boolean executable) {
 		FS.DETECTED.setExecute(

org.eclipse.jgit.test/tst/org/eclipse/jgit/dircache/DirCacheBasicTest.java

@@ -255,9 +255,11 @@ public class DirCacheBasicTest extends RepositoryTestCase {
 		DirCacheBuilder b = dc.builder();
 		DirCacheEntry e = new DirCacheEntry(path);
 		e.setFileMode(FileMode.REGULAR_FILE);
-		e.setObjectId(new ObjectInserter.Formatter().idFor(
+		try (ObjectInserter.Formatter formatter = new ObjectInserter.Formatter()) {
+			e.setObjectId(formatter.idFor(
 					Constants.OBJ_BLOB,
 					Constants.encode(path)));
+		}
 		b.add(e);
 		b.commit();
 		db.readDirCache();

org.eclipse.jgit.test/tst/org/eclipse/jgit/dircache/DirCacheBuilderIteratorTest.java

@@ -78,7 +78,7 @@ public class DirCacheBuilderIteratorTest extends RepositoryTestCase {
 
 		final int expIdx = 2;
 		final DirCacheBuilder b = dc.builder();
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(new DirCacheBuildIterator(b));
 			tw.setRecursive(true);
 			tw.setFilter(PathFilterGroup.createFromStrings(Collections
@@ -95,6 +95,7 @@ public class DirCacheBuilderIteratorTest extends RepositoryTestCase {
 			b.add(c.getDirCacheEntry());
 
 			assertFalse("no more entries", tw.next());
+		}
 
 		b.finish();
 		assertEquals(ents.length, dc.getEntryCount());

org.eclipse.jgit.test/tst/org/eclipse/jgit/dircache/DirCacheCGitCompatabilityTest.java

@@ -98,7 +98,7 @@ public class DirCacheCGitCompatabilityTest extends LocalDiskRepositoryTestCase {
 		assertEquals(ls.size(), dc.getEntryCount());
 		{
 			final Iterator<CGitIndexRecord> rItr = ls.values().iterator();
-			final TreeWalk tw = new TreeWalk(db);
+			try (final TreeWalk tw = new TreeWalk(db)) {
 				tw.setRecursive(true);
 				tw.addTree(new DirCacheIterator(dc));
 				while (rItr.hasNext()) {
@@ -112,6 +112,7 @@ public class DirCacheCGitCompatabilityTest extends LocalDiskRepositoryTestCase {
 				}
 			}
 		}
+	}
 
 	@Test
 	public void testUnsupportedOptionalExtension() throws Exception {

org.eclipse.jgit.test/tst/org/eclipse/jgit/dircache/DirCacheIteratorTest.java

@@ -76,10 +76,11 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 		final DirCache dc = DirCache.newInCore();
 		assertEquals(0, dc.getEntryCount());
 
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(new DirCacheIterator(dc));
 			assertFalse(tw.next());
 		}
+	}
 
 	@Test
 	public void testNoSubtree_NoTreeWalk() throws Exception {
@@ -125,7 +126,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 		b.finish();
 
 		final DirCacheIterator i = new DirCacheIterator(dc);
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(i);
 			int pathIdx = 0;
 			while (tw.next()) {
@@ -139,6 +140,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			}
 			assertEquals(paths.length, pathIdx);
 		}
+	}
 
 	@Test
 	public void testSingleSubtree_NoRecursion() throws Exception {
@@ -162,7 +164,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 		final int expPos[] = { 0, -1, 4 };
 
 		final DirCacheIterator i = new DirCacheIterator(dc);
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(i);
 			tw.setRecursive(false);
 			int pathIdx = 0;
@@ -183,6 +185,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			}
 			assertEquals(expPaths.length, pathIdx);
 		}
+	}
 
 	@Test
 	public void testSingleSubtree_Recursive() throws Exception {
@@ -202,7 +205,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 		b.finish();
 
 		final DirCacheIterator i = new DirCacheIterator(dc);
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(i);
 			tw.setRecursive(true);
 			int pathIdx = 0;
@@ -218,6 +221,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			}
 			assertEquals(paths.length, pathIdx);
 		}
+	}
 
 	@Test
 	public void testTwoLevelSubtree_Recursive() throws Exception {
@@ -236,7 +240,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			b.add(ents[i]);
 		b.finish();
 
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(new DirCacheIterator(dc));
 			tw.setRecursive(true);
 			int pathIdx = 0;
@@ -252,6 +256,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			}
 			assertEquals(paths.length, pathIdx);
 		}
+	}
 
 	@Test
 	public void testReset() throws Exception {
@@ -397,7 +402,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 			b.add(ents[i]);
 		b.finish();
 
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			for (int victimIdx = 0; victimIdx < paths.length; victimIdx++) {
 				tw.reset();
 				tw.addTree(new DirCacheIterator(dc));
@@ -415,6 +420,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 				assertFalse(tw.next());
 			}
 		}
+	}
 
 	@Test
 	public void testRemovedSubtree() throws Exception {
@@ -424,7 +430,7 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 		final DirCache dc = DirCache.read(path, FS.DETECTED);
 		assertEquals(2, dc.getEntryCount());
 
-		final TreeWalk tw = new TreeWalk(db);
+		try (final TreeWalk tw = new TreeWalk(db)) {
 			tw.setRecursive(true);
 			tw.addTree(new DirCacheIterator(dc));
 
@@ -438,4 +444,5 @@ public class DirCacheIteratorTest extends RepositoryTestCase {
 
 			assertFalse(tw.next());
 		}
+	}
 }

org.eclipse.jgit.test/tst/org/eclipse/jgit/gitrepo/ManifestParserTest.java

@@ -43,8 +43,9 @@
 package org.eclipse.jgit.gitrepo;
 
 import static org.junit.Assert.assertTrue;
+import static java.nio.charset.StandardCharsets.UTF_8;
 
-import java.io.StringBufferInputStream;
+import java.io.ByteArrayInputStream;
 import java.util.HashSet;
 import java.util.Set;
 
@@ -77,7 +78,7 @@ public class ManifestParserTest {
 
 		ManifestParser parser = new ManifestParser(
 				null, null, "master", baseUrl, null, null);
-		parser.read(new StringBufferInputStream(xmlContent.toString()));
+		parser.read(new ByteArrayInputStream(xmlContent.toString().getBytes(UTF_8)));
 		// Unfiltered projects should have them all.
 		results.clear();
 		results.add("foo");

org.eclipse.jgit.test/tst/org/eclipse/jgit/internal/storage/file/GcPackRefsTest.java

@@ -118,7 +118,7 @@ public class GcPackRefsTest extends GcTestCase {
 		tr.lightweightTag("t1", a);
 		tr.lightweightTag("t2", a);
 		LockFile refLock = new LockFile(new File(repo.getDirectory(),
-				"refs/tags/t1"), repo.getFS());
+				"refs/tags/t1"));
 		try {
 			refLock.lock();
 			gc.packRefs();

org.eclipse.jgit.test/tst/org/eclipse/jgit/internal/storage/file/LockFileTest.java

@@ -61,7 +61,7 @@ public class LockFileTest extends RepositoryTestCase {
 
 	@Test
 	public void lockFailedExceptionRecovery() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			writeTrashFile("file.txt", "content");
 			git.add().addFilepattern("file.txt").call();
 			RevCommit commit1 = git.commit().setMessage("create file").call();
@@ -71,7 +71,7 @@ public class LockFileTest extends RepositoryTestCase {
 			git.add().addFilepattern("file.txt").call();
 			assertNotNull(git.commit().setMessage("edit file").call());
 
-		LockFile lf = new LockFile(db.getIndexFile(), db.getFS());
+			LockFile lf = new LockFile(db.getIndexFile());
 			assertTrue(lf.lock());
 			try {
 				git.checkout().setName(commit1.name()).call();
@@ -82,4 +82,5 @@ public class LockFileTest extends RepositoryTestCase {
 				git.checkout().setName(commit1.name()).call();
 			}
 		}
+	}
 }

org.eclipse.jgit.test/tst/org/eclipse/jgit/internal/storage/file/RefUpdateTest.java

@@ -597,14 +597,13 @@ public class RefUpdateTest extends SampleDataRepositoryTestCase {
 		RefUpdate updateRef = db.updateRef("refs/heads/master");
 		updateRef.setNewObjectId(pid);
 		LockFile lockFile1 = new LockFile(new File(db.getDirectory(),
-				"refs/heads/master"), db.getFS());
+				"refs/heads/master"));
 		try {
 			assertTrue(lockFile1.lock()); // precondition to test
 			Result update = updateRef.update();
 			assertEquals(Result.LOCK_FAILURE, update);
 			assertEquals(opid, db.resolve("refs/heads/master"));
-			LockFile lockFile2 = new LockFile(new File(db.getDirectory(),"refs/heads/master"),
+			LockFile lockFile2 = new LockFile(new File(db.getDirectory(),"refs/heads/master"));
-					db.getFS());
 			assertFalse(lockFile2.lock()); // was locked, still is
 		} finally {
 			lockFile1.unlock();
@@ -747,8 +746,7 @@ public class RefUpdateTest extends SampleDataRepositoryTestCase {
 				"logs/" + fromName).exists());
 
 		// "someone" has branch X locked
-		LockFile lockFile = new LockFile(new File(db.getDirectory(), toLock),
+		LockFile lockFile = new LockFile(new File(db.getDirectory(), toLock));
-				db.getFS());
 		try {
 			assertTrue(lockFile.lock());
 

org.eclipse.jgit.test/tst/org/eclipse/jgit/lib/DirCacheCheckoutMaliciousPathTest.java

@@ -338,7 +338,8 @@ public class DirCacheCheckoutMaliciousPathTest extends RepositoryTestCase {
 	 */
 	private void testMaliciousPath(boolean good, boolean secondCheckout,
 			String... path) throws GitAPIException, IOException {
-		Git git = new Git(db);
+		try (Git git = new Git(db);
+				RevWalk revWalk = new RevWalk(git.getRepository())) {
 			ObjectInserter newObjectInserter;
 			newObjectInserter = git.getRepository().newObjectInserter();
 			ObjectId blobId = newObjectInserter.insert(Constants.OBJ_BLOB,
@@ -379,7 +380,6 @@ public class DirCacheCheckoutMaliciousPathTest extends RepositoryTestCase {
 			commitBuilder.setParentId(firstCommitId);
 			ObjectId commitId = newObjectInserter.insert(commitBuilder);
 
-		RevWalk revWalk = new RevWalk(git.getRepository());
 			if (!secondCheckout)
 				git.checkout().setStartPoint(revWalk.parseCommit(firstCommitId))
 						.setName("refs/heads/master").setCreateBranch(true).call();
@@ -402,5 +402,6 @@ public class DirCacheCheckoutMaliciousPathTest extends RepositoryTestCase {
 				assertTrue(e.getMessage().startsWith("Invalid path"));
 			}
 		}
+	}
 
 }

org.eclipse.jgit.test/tst/org/eclipse/jgit/lib/IndexDiffTest.java

@@ -148,8 +148,9 @@ public class IndexDiffTest extends RepositoryTestCase {
 		writeTrashFile("file2", "file2");
 		writeTrashFile("dir/file3", "dir/file3");
 
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.add().addFilepattern("file2").addFilepattern("dir/file3").call();
+		}
 
 		writeTrashFile("dir/file3", "changed");
 
@@ -177,8 +178,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 
 	@Test
 	public void testConflicting() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -202,6 +202,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 			MergeResult result = git.merge().include(secondCommit.getId())
 					.setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.CONFLICTING, result.getMergeStatus());
+		}
 
 		FileTreeIterator iterator = new FileTreeIterator(db);
 		IndexDiff diff = new IndexDiff(db, Constants.HEAD, iterator);
@@ -221,8 +222,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 
 	@Test
 	public void testConflictingDeletedAndModified() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			writeTrashFile("b", "1\nb\n3\n");
 			git.add().addFilepattern("a").addFilepattern("b").call();
@@ -244,6 +244,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 			MergeResult result = git.merge().include(secondCommit.getId())
 					.setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.CONFLICTING, result.getMergeStatus());
+		}
 
 		FileTreeIterator iterator = new FileTreeIterator(db);
 		IndexDiff diff = new IndexDiff(db, Constants.HEAD, iterator);
@@ -262,8 +263,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 
 	@Test
 	public void testConflictingFromMultipleCreations() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "1\na\n3\n");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial").call();
@@ -284,6 +284,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 			MergeResult result = git.merge().include(secondCommit.getId())
 					.setStrategy(MergeStrategy.RESOLVE).call();
 			assertEquals(MergeStatus.CONFLICTING, result.getMergeStatus());
+		}
 
 		FileTreeIterator iterator = new FileTreeIterator(db);
 		IndexDiff diff = new IndexDiff(db, Constants.HEAD, iterator);
@@ -304,11 +305,12 @@ public class IndexDiffTest extends RepositoryTestCase {
 		writeTrashFile("a.c", "a.c");
 		writeTrashFile("a=c", "a=c");
 		writeTrashFile("a=d", "a=d");
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			git.add().addFilepattern("a.b").call();
 			git.add().addFilepattern("a.c").call();
 			git.add().addFilepattern("a=c").call();
 			git.add().addFilepattern("a=d").call();
+		}
 
 		TreeFormatter tree = new TreeFormatter();
 		// got the hash id'd from the data using echo -n a.b|git hash-object -t blob --stdin
@@ -338,7 +340,6 @@ public class IndexDiffTest extends RepositoryTestCase {
 	 */
 	@Test
 	public void testUnchangedComplex() throws IOException, GitAPIException {
-		Git git = new Git(db);
 		writeTrashFile("a.b", "a.b");
 		writeTrashFile("a.c", "a.c");
 		writeTrashFile("a/b.b/b", "a/b.b/b");
@@ -346,10 +347,12 @@ public class IndexDiffTest extends RepositoryTestCase {
 		writeTrashFile("a/c", "a/c");
 		writeTrashFile("a=c", "a=c");
 		writeTrashFile("a=d", "a=d");
+		try (Git git = new Git(db)) {
 			git.add().addFilepattern("a.b").addFilepattern("a.c")
 					.addFilepattern("a/b.b/b").addFilepattern("a/b")
 					.addFilepattern("a/c").addFilepattern("a=c")
 					.addFilepattern("a=d").call();
+		}
 
 
 		// got the hash id'd from the data using echo -n a.b|git hash-object -t blob --stdin
@@ -397,11 +400,12 @@ public class IndexDiffTest extends RepositoryTestCase {
 	 */
 	@Test
 	public void testRemovedUntracked() throws Exception{
-		Git git = new Git(db);
 		String path = "file";
+		try (Git git = new Git(db)) {
 			writeTrashFile(path, "content");
 			git.add().addFilepattern(path).call();
 			git.commit().setMessage("commit").call();
+		}
 		removeFromIndex(path);
 		FileTreeIterator iterator = new FileTreeIterator(db);
 		IndexDiff diff = new IndexDiff(db, Constants.HEAD, iterator);
@@ -417,8 +421,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 	 */
 	@Test
 	public void testUntrackedFolders() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			IndexDiff diff = new IndexDiff(db, Constants.HEAD,
 					new FileTreeIterator(db));
 			diff.diff();
@@ -463,6 +466,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 							"target")),
 					diff.getUntrackedFolders());
 		}
+	}
 
 	/**
 	 * Test that ignored folders aren't listed as untracked
@@ -471,8 +475,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 	 */
 	@Test
 	public void testUntrackedNotIgnoredFolders() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			IndexDiff diff = new IndexDiff(db, Constants.HEAD,
 					new FileTreeIterator(db));
 			diff.diff();
@@ -510,10 +513,11 @@ public class IndexDiffTest extends RepositoryTestCase {
 							"target")),
 					diff.getUntrackedFolders());
 		}
+	}
 
 	@Test
 	public void testAssumeUnchanged() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			String path = "file";
 			writeTrashFile(path, "content");
 			git.add().addFilepattern(path).call();
@@ -551,6 +555,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 			assertTrue(diff.getChanged().contains("file"));
 			assertEquals(Collections.EMPTY_SET, diff.getUntrackedFolders());
 		}
+	}
 
 	@Test
 	public void testStageState() throws IOException {
@@ -575,8 +580,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 
 	@Test
 	public void testStageState_mergeAndReset_bug() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "content");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
@@ -635,11 +639,11 @@ public class IndexDiffTest extends RepositoryTestCase {
 					.get("b"));
 			assertTrue(diff.getUntrackedFolders().isEmpty());
 		}
+	}
 
 	@Test
 	public void testStageState_simulated_bug() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
-
 			writeTrashFile("a", "content");
 			git.add().addFilepattern("a").call();
 			RevCommit initialCommit = git.commit().setMessage("initial commit")
@@ -688,10 +692,11 @@ public class IndexDiffTest extends RepositoryTestCase {
 					.get("b"));
 			assertTrue(diff.getUntrackedFolders().isEmpty());
 		}
+	}
 
 	@Test
 	public void testAutoCRLFInput() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			FileBasedConfig config = db.getConfig();
 
 			// Make sure core.autocrlf is false before adding
@@ -717,6 +722,7 @@ public class IndexDiffTest extends RepositoryTestCase {
 					"Expected no modified files, but there were: "
 							+ diff.getModified(), diff.getModified().isEmpty());
 		}
+	}
 
 	private void verifyStageState(StageState expected, int... stages)
 			throws IOException {

org.eclipse.jgit.test/tst/org/eclipse/jgit/lib/IndexModificationTimesTest.java

@@ -49,7 +49,7 @@ public class IndexModificationTimesTest extends RepositoryTestCase {
 
 	@Test
 	public void testLastModifiedTimes() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			String path = "file";
 			writeTrashFile(path, "content");
 			String path2 = "file2";
@@ -83,10 +83,11 @@ public class IndexModificationTimesTest extends RepositoryTestCase {
 			assertTrue("last modified shall not be zero!",
 					entry2.getLastModified() != 0);
 		}
+	}
 
 	@Test
 	public void testModify() throws Exception {
-		Git git = new Git(db);
+		try (Git git = new Git(db)) {
 			String path = "file";
 			writeTrashFile(path, "content");
 
@@ -122,7 +123,7 @@ public class IndexModificationTimesTest extends RepositoryTestCase {
 			assertTrue("shall have equal mod time!", masterLastMod == sideLastMode);
 			assertTrue("shall not equal master timestamp!",
 					entry.getLastModified() == masterLastMod);
-
+		}
 	}
 
 }

org.eclipse.jgit.test/tst/org/eclipse/jgit/merge/MergeAlgorithmTest.java

@@ -259,7 +259,7 @@ public class MergeAlgorithmTest {
 	}
 
 	private String merge(String commonBase, String ours, String theirs) throws IOException {
-		MergeResult r = new MergeAlgorithm().merge(RawTextComparator.DEFAULT,
+		MergeResult<RawText> r = new MergeAlgorithm().merge(RawTextComparator.DEFAULT,
 				T(commonBase), T(ours), T(theirs));
 		ByteArrayOutputStream bo=new ByteArrayOutputStream(50);
 		fmt.formatMerge(bo, r, "B", "O", "T", Constants.CHARACTER_ENCODING);

org.eclipse.jgit.test/tst/org/eclipse/jgit/treewalk/ForPathTest.java

@@ -84,10 +84,10 @@ public class ForPathTest extends RepositoryTestCase {
 			ObjectId tree = tree0.writeTree(oi);
 
 			// Find the directories that were implicitly created above.
-			TreeWalk tw = new TreeWalk(or);
-			tw.addTree(tree);
 			ObjectId a = null;
 			ObjectId aSlashC = null;
+			try (TreeWalk tw = new TreeWalk(or)) {
+				tw.addTree(tree);
 				while (tw.next()) {
 					if (tw.getPathString().equals("a")) {
 						a = tw.getObjectId(0);
@@ -101,6 +101,7 @@ public class ForPathTest extends RepositoryTestCase {
 						break;
 					}
 				}
+			}
 
 			assertEquals(a, TreeWalk.forPath(or, "a", tree).getObjectId(0));
 			assertEquals(a, TreeWalk.forPath(or, "a/", tree).getObjectId(0));

org.eclipse.jgit.test/tst/org/eclipse/jgit/treewalk/filter/InterIndexDiffFilterTest.java

@@ -76,11 +76,12 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 	public void testEmpty() throws IOException {
 		DirCache dc1 = DirCache.newInCore();
 		DirCache dc2 = DirCache.newInCore();
-		TreeWalk tw = new TreeWalk(db);
+		try (TreeWalk tw = new TreeWalk(db)) {
 			tw.addTree(new DirCacheIterator(dc1));
 			tw.addTree(new DirCacheIterator(dc2));
 			assertFalse(tw.next());
 		}
+	}
 
 	static final class AddEdit extends PathEdit {
 
@@ -124,7 +125,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 		editor.add(new AddEdit("a/a", FileMode.REGULAR_FILE, id("a"), 1, false));
 		editor.finish();
 
-		TreeWalk tw = new TreeWalk(db);
+		try (TreeWalk tw = new TreeWalk(db)) {
 			tw.setRecursive(true);
 			tw.addTree(new DirCacheIterator(dc1));
 			tw.addTree(new DirCacheIterator(dc2));
@@ -133,6 +134,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 			assertEquals("a/a", tw.getPathString());
 			assertFalse(tw.next());
 		}
+	}
 
 	@Test
 	public void testTwoSame() throws IOException {
@@ -145,7 +147,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 		ed2.add(new AddEdit("a/a", FileMode.REGULAR_FILE, id("a"), 1, false));
 		ed2.finish();
 
-		TreeWalk tw = new TreeWalk(db);
+		try (TreeWalk tw = new TreeWalk(db)) {
 			tw.setRecursive(true);
 			tw.addTree(new DirCacheIterator(dc1));
 			tw.addTree(new DirCacheIterator(dc2));
@@ -153,6 +155,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 
 			assertFalse(tw.next());
 		}
+	}
 
 	@Test
 	public void testTwoSameDifferByAssumeValid() throws IOException {
@@ -165,7 +168,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 		ed2.add(new AddEdit("a/a", FileMode.REGULAR_FILE, id("a"), 1, true));
 		ed2.finish();
 
-		TreeWalk tw = new TreeWalk(db);
+		try (TreeWalk tw = new TreeWalk(db)) {
 			tw.setRecursive(true);
 			tw.addTree(new DirCacheIterator(dc1));
 			tw.addTree(new DirCacheIterator(dc2));
@@ -175,6 +178,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 			assertEquals("a/a", tw.getPathString());
 			assertFalse(tw.next());
 		}
+	}
 
 	@Test
 	public void testTwoSameSameAssumeValidDifferentContent()
@@ -188,7 +192,7 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 		ed2.add(new AddEdit("a/a", FileMode.REGULAR_FILE, id("b"), 1, true));
 		ed2.finish();
 
-		TreeWalk tw = new TreeWalk(db);
+		try (TreeWalk tw = new TreeWalk(db)) {
 			tw.setRecursive(true);
 			tw.addTree(new DirCacheIterator(dc1));
 			tw.addTree(new DirCacheIterator(dc2));
@@ -196,4 +200,5 @@ public class InterIndexDiffFilterTest extends LocalDiskRepositoryTestCase {
 
 			assertFalse(tw.next());
 		}
+	}
 }

org.eclipse.jgit/src/org/eclipse/jgit/dircache/DirCache.java

@@ -344,9 +344,6 @@ public class DirCache {
 	/** Our active lock (if we hold it); null if we don't have it locked. */
 	private LockFile myLock;
 
-	/** file system abstraction **/
-	private final FS fs;
-
 	/** Keep track of whether the index has changed or not */
 	private FileSnapshot snapshot;
 
@@ -376,7 +373,6 @@ public class DirCache {
 	 */
 	public DirCache(final File indexLocation, final FS fs) {
 		liveFile = indexLocation;
-		this.fs = fs;
 		clear();
 	}
 
@@ -611,7 +607,7 @@ public class DirCache {
 	public boolean lock() throws IOException {
 		if (liveFile == null)
 			throw new IOException(JGitText.get().dirCacheDoesNotHaveABackingFile);
-		final LockFile tmp = new LockFile(liveFile, fs);
+		final LockFile tmp = new LockFile(liveFile);
 		if (tmp.lock()) {
 			tmp.setNeedStatInformation(true);
 			myLock = tmp;

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/dfs/InMemoryRepository.java

@@ -274,7 +274,7 @@ public class InMemoryRepository extends DfsRepository {
 					if (performsAtomicTransactions()) {
 						try {
 							lock.writeLock().lock();
-							batch(walk, getCommands());
+							batch(getCommands());
 						} finally {
 							lock.writeLock().unlock();
 						}
@@ -304,7 +304,7 @@ public class InMemoryRepository extends DfsRepository {
 			return new RefCache(ids.toRefList(), sym.toRefList());
 		}
 
-		private void batch(RevWalk walk, List<ReceiveCommand> cmds) {
+		private void batch(List<ReceiveCommand> cmds) {
 			// Validate that the target exists in a new RevWalk, as the RevWalk
 			// from the RefUpdate might be reading back unflushed objects.
 			Map<ObjectId, ObjectId> peeled = new HashMap<>();

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/FileRepository.java

@@ -354,7 +354,7 @@ public class FileRepository extends Repository {
 						ConfigConstants.CONFIG_KEY_WORKTREE, getWorkTree()
 								.getAbsolutePath());
 				LockFile dotGitLockFile = new LockFile(new File(workTree,
-						Constants.DOT_GIT), getFS());
+						Constants.DOT_GIT));
 				try {
 					if (dotGitLockFile.lock()) {
 						dotGitLockFile.write(Constants.encode(Constants.GITDIR

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/PackLock.java

@@ -53,7 +53,6 @@ import org.eclipse.jgit.util.FileUtils;
 /** Keeps track of a {@link PackFile}'s associated <code>.keep</code> file. */
 public class PackLock {
 	private final File keepFile;
-	private final FS fs;
 
 	/**
 	 * Create a new lock for a pack file.
@@ -67,7 +66,6 @@ public class PackLock {
 		final File p = packFile.getParentFile();
 		final String n = packFile.getName();
 		keepFile = new File(p, n.substring(0, n.length() - 5) + ".keep"); //$NON-NLS-1$
-		this.fs = fs;
 	}
 
 	/**
@@ -84,7 +82,7 @@ public class PackLock {
 			return false;
 		if (!msg.endsWith("\n")) //$NON-NLS-1$
 			msg += "\n"; //$NON-NLS-1$
-		final LockFile lf = new LockFile(keepFile, fs);
+		final LockFile lf = new LockFile(keepFile);
 		if (!lf.lock())
 			return false;
 		lf.write(Constants.encode(msg));

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/RefDirectory.java

@@ -588,8 +588,7 @@ public class RefDirectory extends RefDatabase {
 		// we don't miss an edit made externally.
 		final PackedRefList packed = getPackedRefs();
 		if (packed.contains(name)) {
-			LockFile lck = new LockFile(packedRefsFile,
+			LockFile lck = new LockFile(packedRefsFile);
-					update.getRepository().getFS());
 			if (!lck.lock())
 				throw new LockFailedException(packedRefsFile);
 			try {
@@ -639,7 +638,7 @@ public class RefDirectory extends RefDatabase {
 		FS fs = parent.getFS();
 
 		// Lock the packed refs file and read the content
-		LockFile lck = new LockFile(packedRefsFile, fs);
+		LockFile lck = new LockFile(packedRefsFile);
 		if (!lck.lock())
 			throw new IOException(MessageFormat.format(
 					JGitText.get().cannotLock, packedRefsFile));
@@ -670,8 +669,7 @@ public class RefDirectory extends RefDatabase {
 				File refFile = fileFor(refName);
 				if (!fs.exists(refFile))
 					continue;
-				LockFile rLck = new LockFile(refFile,
+				LockFile rLck = new LockFile(refFile);
-						parent.getFS());
 				if (!rLck.lock())
 					continue;
 				try {

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/RefDirectoryUpdate.java

@@ -79,7 +79,7 @@ class RefDirectoryUpdate extends RefUpdate {
 		if (deref)
 			dst = dst.getLeaf();
 		String name = dst.getName();
-		lock = new LockFile(database.fileFor(name), getRepository().getFS());
+		lock = new LockFile(database.fileFor(name));
 		if (lock.lock()) {
 			dst = database.getRef(name);
 			setOldObjectId(dst != null ? dst.getObjectId() : null);

org.eclipse.jgit/src/org/eclipse/jgit/merge/MergeFormatter.java

@@ -102,7 +102,7 @@ public class MergeFormatter {
 	 *            metadata
 	 * @throws IOException
 	 */
-	public void formatMerge(OutputStream out, MergeResult res, String baseName,
+	public void formatMerge(OutputStream out, MergeResult<RawText> res, String baseName,
 			String oursName, String theirsName, String charsetName) throws IOException {
 		List<String> names = new ArrayList<String>(3);
 		names.add(baseName);

org.eclipse.jgit/src/org/eclipse/jgit/storage/file/FileBasedConfig.java

@@ -74,8 +74,6 @@ import org.eclipse.jgit.util.RawParseUtils;
 public class FileBasedConfig extends StoredConfig {
 	private final File configFile;
 
-	private final FS fs;
-
 	private boolean utf8Bom;
 
 	private volatile FileSnapshot snapshot;
@@ -109,7 +107,6 @@ public class FileBasedConfig extends StoredConfig {
 	public FileBasedConfig(Config base, File cfgLocation, FS fs) {
 		super(base);
 		configFile = cfgLocation;
-		this.fs = fs;
 		this.snapshot = FileSnapshot.DIRTY;
 		this.hash = ObjectId.zeroId();
 	}
@@ -203,7 +200,7 @@ public class FileBasedConfig extends StoredConfig {
 			out = Constants.encode(text);
 		}
 
-		final LockFile lf = new LockFile(getFile(), fs);
+		final LockFile lf = new LockFile(getFile());
 		if (!lf.lock())
 			throw new LockFailedException(getFile());
 		try {

org.eclipse.jgit/src/org/eclipse/jgit/transport/FetchProcess.java

@@ -314,8 +314,7 @@ class FetchProcess {
 		File meta = transport.local.getDirectory();
 		if (meta == null)
 			return;
-		final LockFile lock = new LockFile(new File(meta, "FETCH_HEAD"), //$NON-NLS-1$
+		final LockFile lock = new LockFile(new File(meta, "FETCH_HEAD")); //$NON-NLS-1$
-				transport.local.getFS());
 		try {
 			if (lock.lock()) {
 				final Writer w = new OutputStreamWriter(lock.getOutputStream());