An orphan file is either a bitmap or an idx file in pack folder,
and its corresponding pack file is missing.
Change-Id: I3c4cb1f7aa99dd7b398bdb8d513f528d7761edff
Signed-off-by: Hongkai Liu <hongkai.liu@ericsson.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Using try-with-resource means that close() will automatically be
called on the Repository object. However, according to the javadoc
of Git#close():
If the repository was opened by a static factory method in this class,
then this method calls Repository#close() on the underlying repository
instance.
This means that Repository#close() is called twice, by Git.close()
and in the outer try-with-resource, leading to a corrupt use count.
Change-Id: I37ba517eb2cc67d1cd36813598772c70208d0bc9
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Otherwise these methods may produce unexpected results if used for
strings that are intended to be interpreted locale independently.
Examples are programming language identifiers, protocol keys, and HTML
tags. For instance, "TITLE".toLowerCase() in a Turkish locale returns
"t\u0131tle", where '\u0131' is the LATIN SMALL LETTER DOTLESS I
character.
See
https://docs.oracle.com/javase/8/docs/api/java/lang/String.html#toLowerCase--http://blog.thetaphi.de/2012/07/default-locales-default-charsets-and.html
Bug: 511238
Change-Id: Id8d8f37d84d62239c918b81f8d883ed798d87656
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Logging the repository name makes it easier to track down what is
incorrectly closing a repository.
Change-Id: I42a8bdf766c0e67f100adbf76d9616584e367ac2
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
The Compacter and Garbage Collector will record the estimated size of
the newly going to be created compact, gc or garbage packs. This
information can be used by the clients to better make a call on how to
actually store the pack based on the approximated expected size.
Added a new protected method DfsObjDatabase.newPack(PackSource
packSource, long estimatedPackSize), so that the clients can override
this method to make use of the estimatedPackSize while creating a new
PackDescription object. The default implementation of this method is
equivalent to
newPack(packSource).setEstimatedPackSize(estimatedPackSize). I didn't
make it abstract because that would force all the existing sub classes
of DfsObjDatabase to implement this method. Due to this default
implementation, the estimatedPackSize is added to DfsPackDescription
using a setter instead of a constructor parameter (even though
constructor parameter would be a better choice as this value is set only
during the object creation).
Change-Id: Iade1122633ea774c2e842178a6a6cbb4a57b598b
Signed-off-by: Thirumala Reddy Mutchukota <thirumala@google.com>
Adds the param information to the private method. These are generated
via tooltip to resolve the compile errors.
Bug: 511043
Change-Id: I9ba551978eab750326d1a067b296e3ae93925871
Signed-off-by: Lars Vogel <Lars.Vogel@vogella.com>
These packages don't use @since tags because they are not part of the
stable public API. Some @since tags snuck in, though. Remove them to
make the convention easier to find for new contributors and the
expectations clearer for users.
Change-Id: I6c17d3cfc93657f1b33cf5c5708f2b1c712b0d31
An unreferenced object might appear in a pack. This could only happen
because it was previously referenced, and then later that reference
was removed. When we gc, we copy the referenced objects into a new
pack, and delete the old pack. This would remove the unreferenced
object. Now we first create a loose object from any unreferenced
object in the doomed pack. This kicks off the two-week grace period
for that object, after which it will be collected if it's not
referenced.
This matches the behavior of regular git.
Change-Id: I59539aca1d0d83622c41aa9bfbdd72fa868ee9fb
Signed-off-by: David Turner <dturner@twosigma.com>
Signed-off-by: Jonathan Nieder <jrn@google.com>
It can be considered a programming error to create a Future<T>
but do nothing with that object. There is an async computation
happening and without holding and checking the Future for done
or exception the caller has no idea if it has completed.
FS doesn't really care about these StreamGobblers finishing.
Instead use Runnable with execute(Runnable), which doesn't
return a Future.
Change-Id: I93b66d1f6c869e66be5c1169d8edafe781e601f6
The new --preserve-oldpacks option moves old pack files into the
preserved subdirectory instead of deleting them after repacking.
The new --prune-preserved option prunes old pack files from the
preserved subdirectory after repacking, but before potentially
moving the latest old packfiles to this subdirectory.
These options are designed to prevent stale file handle exceptions
during git operations which can happen on users of NFS repos when
repacking is done on them. The strategy is to preserve old pack files
around until the next repack with the hopes that they will become
unreferenced by then and not cause any exceptions to running processes
when they are finally deleted (pruned).
Change-Id: If3f729f0d9ce920ee2c3e6acdde46f2068be61d2
Signed-off-by: James Melvin <jmelvin@codeaurora.org>
The initial implementation only builds the packages consumed by
Gerrit Code Review.
Test build and execution is not implemented.
We prefer to consume maven_jar custom rule from bazlets repository,
for the same reasons as in the Gerrit project:
* Caching artifacts across different clones and projects
* Exposing source classifiers and neverlink artifact
TEST PLAN:
$ bazel build :all
$ unzip -t bazel-genfiles/all.zip
Archive: bazel-genfiles/all.zip
testing: libjgit-archive.jar OK
testing: libjgit-servlet.jar OK
testing: libjgit.jar OK
testing: libjunit.jar OK
No errors detected in compressed data of bazel-genfiles/all.zip.
Change-Id: Ia837ce95d9829fe2515f37b7a04a71a4598672a0
Signed-off-by: David Ostrovsky <david@ostrovsky.org>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Generic normalization method for a possible invalid branch name.
The method compresses dividers between spaces, then replaces spaces
and non word characters with underscores.
This method is needed in preparation for subsequent EGit changes.
Bug: 509878
Change-Id: Ic0d12f098f90f912a45bcc5693d6accf751d4e58
Signed-off-by: Wim Jongman <wim.jongman@remainsoftware.com>
If there are untracked changes, apply only the untracked tree
after a successful merge. The merge tree from merging untracked
with HEAD would also contain files already reset before (changes
in tracked files) and try to reset those again,leading to false
checkout conflicts.
Bug: 505804
Change-Id: Iaced4d277623334d11e3d1cca5969590d7c5093e
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
ObjectDirectory.getShallowCommits should throw an IOException
instead of an InvalidArgumentException if invalid SHAs are present
in .git/shallow (as this file is usually edited by a human).
Change-Id: Ia3a39d38f7aec4282109c7698438f0795fbec905
Signed-off-by: Marc Strapetz <marc.strapetz@syntevo.com>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
The 12 bytes `PACK...` header is written in PackWriter before reading
CachedPack files. In DfsPackFile#copyPackBypassCache, the header was not
skipped when the first block is not in cache.
Change-Id: Ibbe2e564d36b79922a936657f286addb1044d237
Signed-off-by: Zhen Chen <czhen@google.com>
Add new variation of TreeFilter in order to detect LFS pointer files in
the repository.
Additionally, update LfsPointer to support the legacy version URL [1] as
described in [2], and to allow arbitrary fields in the pointer file.
[1] https://hawser.github.com/spec/v1
[2] https://github.com/git-lfs/git-lfs/blob/master/docs/spec.md
Change-Id: I621eb058619fb1b78888a54c4b60bb110a722fc3
Signed-off-by: Dariusz Luksza <dariusz@luksza.org>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This fixes a nasty performance issue for repositories that have many
objects referenced through refs/tags/, but not in refs/heads/.
Situations like this can arise when a project has made releases like
refs/tags/v1.0, and then decides to orphan history and start over for
version 2. The v1.0 objects are not reachable from master anymore,
but are still live due to the v1.0 tag.
When tags are packed in the GC_OTHER pack, bitmaps are not able to
cover the repository's contents. This may cause very slow counting
times during git clone, as the server must enumerate the ancient
history under refs/tags/ to respond to the client.
Clients by default always ask for all tags when asking for all heads
during clone. This has been true since git-core commit 8434c2f1afedb
(Apr 27 2008), when clone was converted to a builtin. Including tags
in the main GC pack should still allow servers to benefit from the
fast full pack reuse path when serving a clone to a client.
Change-Id: I22e29517b5bc6fa3d6b19a19f13bef0c68afdca3
Previously it was looking for a keep file with the name of a pack file
(extenstion included) appended with a '.keep'. However, the keep file
name should be the pack file name with a '.keep' extension
Change-Id: I9dc4c7c393ae20aefa0b9507df8df83610ce4d42
Signed-off-by: James Melvin <jmelvin@codeaurora.org>
We only need the tree id to add it to a TreeWalk so change tree's type
to AnyObjectId.
Bug: 509385
Change-Id: I98dd5fef15cd173fe1fd84273f0f48e64e12e608
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
When a repository is being GCed and a concurrent push is received, there
is the possibility of having a missing object. This is due to the fact
that after the list of objects to delete is built, there is a window of
time when an unreferenced and ready to delete object can be referenced
by the incoming push. In that case, the object would be deleted because
there is no way to know it is no longer unreferenced. This will leave
the repository in an inconsistent state and most of the operations fail
with a missing tree/object error.
Given the incoming push change the last modified date for the now
referenced object, verify this one is still a candidate to delete
before actually performing the delete operation.
Change-Id: Iadcb29b8eb24b0cb4bb9335b670443c138a60787
Signed-off-by: Hector Oswaldo Caballero <hector.caballero@ericsson.com>
FileSnapshot.isModified may have reported a file to be clean although it
was actually dirty.
Imagine you have a FileSnapshot on file f. lastmodified and lastread are
both t0. Now time is t1 and you
1) modify the file
2) update the FileSnapshot of the file (lastModified=t1, lastRead=t1)
3) modify the file again
4) wait 3 seconds
5) ask the Filesnapshot whether the file is dirty or not. It erroneously
answered it's clean.
Any file which has been modified longer than 2.5 seconds ago was
reported to be clean. As the test shows that's not always correct.
The real-world problem fixed by this change is the following:
* A gerrit server using JGit to serve git repositories is processing
fetch requests while simultaneously a native git garbage collection
runs on the repo.
* At time t1 native git writes temporary files in the pack folder
setting the mtime of the pack folder to t1.
* A fetch request causes JGit to search for new packfiles and JGit
remembers this scan in a Filesnapshot on the packs folder. Since the gc
is not finished JGit doesn't see any new packfiles.
* The fetch is processed and the gc ends while the filesystem timer is
still t1. GC writes a new packfile and deletes the old packfile.
* 3 seconds later another request arrives. JGit does not yet know about
the new packfile but is also not rescanning the pack folder because it
cached that the last scan happened at time t1 and pack folder's mtime is
also t1. Now JGit will not be able to resolve any object contained in
this new pack. This behavior may be persistent if objects referenced by
the ref/meta/config branch are affected so gerrit can't read permissions
stored in the refs/meta/config branch anymore and will not allow any
pushes anymore. The pack folder will not change its mtime and therefore
no rescan will take place.
Change-Id: I3efd0ccffeb97b01207dc3e7a6b85c6b06928fad
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
When the reply is already compressed (e.g. a packfile fetched using dumb
HTTP), "Content-Encoding: gzip" wastes bandwidth relative to sending the
content raw. So don't "Accept-Encoding: gzip" for such requests.
Change-Id: Id25702c0b0ed2895df8e9790052c3417d713572c
Signed-off-by: Zhen Chen <czhen@google.com>
The add(long) method was deprecated in favor of addWord(long) in
the 0.8.3 release of JavaEWAH [1].
[1] https://github.com/lemire/javaewah/commit/e443cf5e
Change-Id: I89c397ed02e040f57663d04504399dfdc0889626
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Fix JGits merge-base calculation in case of inconsistent commit times.
JGit was potentially failing to compute correct merge-bases when the
commit times where inconsistent (a parent commit was younger than a
child commit). The code in MergeBaseGenerator was aware of the fact that
sometimes the discovery of a merge base x can occur after the parents of
x have been seen (see comment in #carryOntoOne()). But in the light of
inconsistent commit times it was possible that these parents of a
merge-base have already been returned as a merge-base.
This commit fixes the bug by buffering all commits generated by
MergeBaseGenerator. It is expected that this buffer will be small
because the number of merge-bases will be small. Additionally a new
flag is used to mark the ancestors of merge-bases. This allows to filter
out the unwanted commits.
Bug: 507584
Change-Id: I9cc140b784c3231b972bd2c3de61a789365237ab
This does not address all cases where no message is specified, only
cases where Repository#isValidRefName returns false.
Change-Id: Ib88cdabfdcdf37be0053e06949b0e21ad87a9575
Signed-off-by: Grace Wang <gracewang92@gmail.com>
TransportHttp sets 'Accept-Encoding: gzip' to allow the server to
compress HTTP responses. When fetching a loose object over HTTP, it
uses the following code to read the response:
InputStream in = openInputStream(c);
int len = c.getContentLength();
return new FileStream(in, len);
If the content is gzipped, openInputStream decompresses it and produces
the correct content for the object. Unfortunately the Content-Length
header contains the length of the compressed stream instead of the
actual content length. Use a length of -1 instead since we don't know
the actual length.
Loose objects are already compressed, so the gzip encoding typically
produces a longer compressed payload. The value from the Content-Length
is too high, producing EOFException: Short read of block.
Change-Id: I8d5284dad608e3abd8217823da2b365e8cd998b0
Signed-off-by: Zhen Chen <czhen@google.com>
Helped-by: Jonathan Nieder <jrn@google.com>
The InputStream in FileStream in downloadPack is never closed.
Change-Id: I59975d0b8d51f4b3e3ba9d4496b254d508cb936d
Signed-off-by: Zhen Chen <czhen@google.com>
Hongkai Liu
David Pursehouse
Matthias Sohn
Thirumala Reddy Mutchukota
Lars Vogel
Jonathan Nieder
David Turner
Shawn Pearce
James Melvin
David Ostrovsky
Wim Jongman
Thomas Wolf
Marc Strapetz
Zhen Chen
Dariusz Luksza
Hector Oswaldo Caballero
Christian Halstrick
Grace Wang