RefDatabase: Introduce getAllRefs method

Currently to get all refs, callers must use:

  getRefsByPrefix(ALL)

Introduce getAllRefs, which does this, and migrate all existing
callers of getRefsByPrefix(ALL).

Change-Id: I7b1687c162c8ae836dc7db3ccc7ac847863f691d
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/RevParse.java

@@ -45,8 +45,6 @@
 
 package org.eclipse.jgit.pgm;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.util.ArrayList;
 import java.util.List;
 
@@ -73,7 +71,7 @@ class RevParse extends TextBuiltin {
 	@Override
 	protected void run() throws Exception {
 		if (all) {
-			List<Ref> allRefs = db.getRefDatabase().getRefsByPrefix(ALL);
+			List<Ref> allRefs = db.getRefDatabase().getAllRefs();
 			for (final Ref r : allRefs) {
 				ObjectId objectId = r.getObjectId();
 				// getRefs skips dangling symrefs, so objectId should never be

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/RevWalkTextBuiltin.java

@@ -53,7 +53,6 @@ import org.eclipse.jgit.errors.IncorrectObjectTypeException;
 import org.eclipse.jgit.lib.Constants;
 import org.eclipse.jgit.lib.ObjectId;
 import org.eclipse.jgit.lib.Ref;
-import org.eclipse.jgit.lib.RefDatabase;
 import org.eclipse.jgit.pgm.internal.CLIText;
 import org.eclipse.jgit.pgm.opt.PathTreeFilterHandler;
 import org.eclipse.jgit.revwalk.FollowFilter;
@@ -170,8 +169,7 @@ abstract class RevWalkTextBuiltin extends TextBuiltin {
 			walk.setRevFilter(AndRevFilter.create(revLimiter));
 
 		if (all) {
-			List<Ref> refs =
+			List<Ref> refs = db.getRefDatabase().getAllRefs();
-					db.getRefDatabase().getRefsByPrefix(RefDatabase.ALL);
 			for (Ref a : refs) {
 				ObjectId oid = a.getPeeledObjectId();
 				if (oid == null)

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/ShowRef.java

@@ -45,8 +45,6 @@
 
 package org.eclipse.jgit.pgm;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.IOException;
 import java.util.List;
 
@@ -67,7 +65,7 @@ class ShowRef extends TextBuiltin {
 	}
 
 	private Iterable<Ref> getSortedRefs() throws Exception {
-		List<Ref> all = db.getRefDatabase().getRefsByPrefix(ALL);
+		List<Ref> all = db.getRefDatabase().getAllRefs();
 		// TODO(jrn) check if we can reintroduce fast-path by e.g. implementing
 		// SortedList
 		return RefComparator.sort(all);

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/debug/RebuildCommitGraph.java

@@ -43,8 +43,6 @@
 
 package org.eclipse.jgit.pgm.debug;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.BufferedReader;
 import java.io.File;
 import java.io.FileInputStream;
@@ -117,7 +115,7 @@ class RebuildCommitGraph extends TextBuiltin {
 	/** {@inheritDoc} */
 	@Override
 	protected void run() throws Exception {
-		if (!really && !db.getRefDatabase().getRefsByPrefix(ALL).isEmpty()) {
+		if (!really && !db.getRefDatabase().getAllRefs().isEmpty()) {
 			File directory = db.getDirectory();
 			String absolutePath = directory == null ? "null" //$NON-NLS-1$
 					: directory.getAbsolutePath();
@@ -247,8 +245,7 @@ class RebuildCommitGraph extends TextBuiltin {
 
 	private void deleteAllRefs() throws Exception {
 		final RevWalk rw = new RevWalk(db);
-		List<Ref> refs = db.getRefDatabase().getRefsByPrefix(ALL);
+		for (Ref r : db.getRefDatabase().getAllRefs()) {
-		for (final Ref r : refs) {
 			if (Constants.HEAD.equals(r.getName()))
 				continue;
 			final RefUpdate u = db.updateRef(r.getName());

org.eclipse.jgit.pgm/src/org/eclipse/jgit/pgm/debug/RebuildRefTree.java

@@ -154,7 +154,7 @@ class RebuildRefTree extends TextBuiltin {
 					head));
 		}
 
-		for (Ref r : refdb.getRefsByPrefix(RefDatabase.ALL)) {
+		for (Ref r : refdb.getAllRefs()) {
 			if (r.getName().equals(txnCommitted) || r.getName().equals(HEAD)
 					|| r.getName().startsWith(txnNamespace)) {
 				continue;

org.eclipse.jgit/src/org/eclipse/jgit/api/LogCommand.java

@@ -42,8 +42,6 @@
  */
 package org.eclipse.jgit.api;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.IOException;
 import java.text.MessageFormat;
 import java.util.ArrayList;
@@ -274,8 +272,7 @@ public class LogCommand extends GitCommand<Iterable<RevCommit>> {
 	 *             the references could not be accessed
 	 */
 	public LogCommand all() throws IOException {
-		List<Ref> refs = getRepository().getRefDatabase().getRefsByPrefix(ALL);
+		for (Ref ref : getRepository().getRefDatabase().getAllRefs()) {
-		for (Ref ref : refs) {
 			if(!ref.isPeeled())
 				ref = getRepository().peel(ref);
 

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/dfs/DfsGarbageCollector.java

@@ -403,7 +403,7 @@ public class DfsGarbageCollector {
 	}
 
 	private Collection<Ref> getAllRefs() throws IOException {
-		Collection<Ref> refs = refdb.getRefsByPrefix(RefDatabase.ALL);
+		Collection<Ref> refs = refdb.getAllRefs();
 		List<Ref> addl = refdb.getAdditionalRefs();
 		if (!addl.isEmpty()) {
 			List<Ref> all = new ArrayList<>(refs.size() + addl.size());

org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/GC.java

@@ -1068,7 +1068,7 @@ public class GC {
 	 */
 	private Collection<Ref> getAllRefs() throws IOException {
 		RefDatabase refdb = repo.getRefDatabase();
-		Collection<Ref> refs = refdb.getRefsByPrefix(RefDatabase.ALL);
+		Collection<Ref> refs = refdb.getAllRefs();
 		List<Ref> addl = refdb.getAdditionalRefs();
 		if (!addl.isEmpty()) {
 			List<Ref> all = new ArrayList<>(refs.size() + addl.size());
@@ -1376,7 +1376,7 @@ public class GC {
 		}
 
 		RefDatabase refDb = repo.getRefDatabase();
-		for (Ref r : refDb.getRefsByPrefix(RefDatabase.ALL)) {
+		for (Ref r : refDb.getAllRefs()) {
 			Storage storage = r.getStorage();
 			if (storage == Storage.LOOSE || storage == Storage.LOOSE_PACKED)
 				ret.numberOfLooseRefs++;

org.eclipse.jgit/src/org/eclipse/jgit/lib/RefDatabase.java

@@ -391,6 +391,22 @@ public abstract class RefDatabase {
 		return Collections.unmodifiableList(result);
 	}
 
+	/**
+	 * Returns all refs.
+	 * <p>
+	 * Callers interested in only a portion of the ref hierarchy can call
+	 * {@link #getRefsByPrefix} instead.
+	 *
+	 * @return immutable list of all refs.
+	 * @throws java.io.IOException
+	 *             the reference space cannot be accessed.
+	 * @since 5.0
+	 */
+	@NonNull
+	public List<Ref> getAllRefs() throws IOException {
+		return getRefsByPrefix(ALL);
+	}
+
 	/**
 	 * Get the additional reference-like entities from the repository.
 	 * <p>

org.eclipse.jgit/src/org/eclipse/jgit/transport/BasePackFetchConnection.java

@@ -45,8 +45,6 @@
 
 package org.eclipse.jgit.transport;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.IOException;
 import java.io.InputStream;
 import java.io.OutputStream;
@@ -439,7 +437,7 @@ public abstract class BasePackFetchConnection extends BasePackConnection
 
 	private void markReachable(final Set<ObjectId> have, final int maxTime)
 			throws IOException {
-		for (Ref r : local.getRefDatabase().getRefsByPrefix(ALL)) {
+		for (Ref r : local.getRefDatabase().getAllRefs()) {
 			ObjectId id = r.getPeeledObjectId();
 			if (id == null)
 				id = r.getObjectId();

org.eclipse.jgit/src/org/eclipse/jgit/transport/BundleFetchConnection.java

@@ -47,8 +47,6 @@
 
 package org.eclipse.jgit.transport;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.BufferedInputStream;
 import java.io.IOException;
 import java.io.InputStream;
@@ -256,8 +254,7 @@ class BundleFetchConnection extends BaseFetchConnection {
 
 			List<Ref> localRefs;
 			try {
-				localRefs = transport.local.getRefDatabase()
+				localRefs = transport.local.getRefDatabase().getAllRefs();
-						.getRefsByPrefix(ALL);
 			} catch (IOException e) {
 				throw new TransportException(transport.uri, e.getMessage(), e);
 			}

org.eclipse.jgit/src/org/eclipse/jgit/transport/Transport.java

@@ -47,7 +47,6 @@
 package org.eclipse.jgit.transport;
 
 import static org.eclipse.jgit.lib.Constants.CHARSET;
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
 
 import java.io.BufferedReader;
 import java.io.IOException;
@@ -689,7 +688,7 @@ public abstract class Transport implements AutoCloseable {
 	private static Collection<RefSpec> expandPushWildcardsFor(
 			final Repository db, final Collection<RefSpec> specs)
 			throws IOException {
-		final List<Ref> localRefs = db.getRefDatabase().getRefsByPrefix(ALL);
+		final List<Ref> localRefs = db.getRefDatabase().getAllRefs();
 		final Collection<RefSpec> procRefs = new LinkedHashSet<>();
 
 		for (final RefSpec spec : specs) {

org.eclipse.jgit/src/org/eclipse/jgit/transport/UploadPack.java

@@ -90,7 +90,6 @@ import org.eclipse.jgit.lib.ObjectId;
 import org.eclipse.jgit.lib.ObjectReader;
 import org.eclipse.jgit.lib.ProgressMonitor;
 import org.eclipse.jgit.lib.Ref;
-import org.eclipse.jgit.lib.RefDatabase;
 import org.eclipse.jgit.lib.Repository;
 import org.eclipse.jgit.revwalk.AsyncRevObjectQueue;
 import org.eclipse.jgit.revwalk.BitmapWalker;
@@ -776,7 +775,7 @@ public class UploadPack {
 
 	private Map<String, Ref> getAdvertisedOrDefaultRefs() throws IOException {
 		if (refs == null)
-			setAdvertisedRefs(db.getRefDatabase().getRefs(RefDatabase.ALL));
+			setAdvertisedRefs(db.getRefDatabase().getRefs(ALL));
 		return refs;
 	}
 
@@ -1583,7 +1582,7 @@ public class UploadPack {
 			else if (!wants.isEmpty()) {
 				Set<ObjectId> refIds =
 						refIdSet(up.getRepository().getRefDatabase()
-								.getRefsByPrefix(ALL));
+								.getAllRefs());
 				for (ObjectId obj : wants) {
 					if (!refIds.contains(obj))
 						throw new WantNotValidException(obj);
@@ -1603,8 +1602,7 @@ public class UploadPack {
 		public void checkWants(UploadPack up, List<ObjectId> wants)
 				throws PackProtocolException, IOException {
 			checkNotAdvertisedWants(up, wants,
-					refIdSet(up.getRepository().getRefDatabase()
+					refIdSet(up.getRepository().getRefDatabase().getAllRefs()));
-							.getRefsByPrefix(ALL)));
 		}
 	}
 

org.eclipse.jgit/src/org/eclipse/jgit/transport/WalkFetchConnection.java

@@ -44,8 +44,6 @@
 
 package org.eclipse.jgit.transport;
 
-import static org.eclipse.jgit.lib.RefDatabase.ALL;
-
 import java.io.File;
 import java.io.FileNotFoundException;
 import java.io.FileOutputStream;
@@ -691,7 +689,7 @@ class WalkFetchConnection extends BaseFetchConnection {
 	private void markLocalRefsComplete(final Set<ObjectId> have) throws TransportException {
 		List<Ref> refs;
 		try {
-			refs = local.getRefDatabase().getRefsByPrefix(ALL);
+			refs = local.getRefDatabase().getAllRefs();
 		} catch (IOException e) {
 			throw new TransportException(e.getMessage(), e);
 		}